New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2671963 = | 39 (0.770) | 4 (0.080) | 4/250 | NT | 8.4% | coding (355/2610 nt) | acnB | aconitate hydratase B |
? | NC_002947 | 2672016 = | 50 (1.020) | coding (302/2610 nt) | acnB | aconitate hydratase B |
GAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2672020‑2671963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTGGCGACGGCGGAGA > NC_002947/2672016‑2672115 GAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTG < 5:151071/145‑1 GAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTG > 6:151071/1‑145 CTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTGGCGACGGCGGAGA < 1:149505/140‑1 CTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTGGCGACGGCGGAGA > 2:149505/1‑140 GAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2672020‑2671963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGGCGACTTGGCTTCGCCCTTGGCGACGGCGGAGA > NC_002947/2672016‑2672115 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |