New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4249166 | 53 (1.050) | 4 (0.080) | 4/246 | NT | 7.6% | coding (861/2118 nt) | PP_3724 | acyl‑CoA synthetase |
? | NC_002947 | = 4249191 | 47 (0.980) | coding (836/2118 nt) | PP_3724 | acyl‑CoA synthetase |
ACCTCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4249014‑4249166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC < NC_002947/4249191‑4249046 ACCTCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGTGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGC > 8:249895/1‑149 ACCTCAGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGC < 2:273210/149‑1 CCTCGGCCAGTGCCGCCACCTGCCCTAGCTCGAGCTGCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCG < 5:80366/149‑1 TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC > 2:144260/1‑149 TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC > 2:64066/1‑149 TCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC > 6:294620/1‑149 GGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGC < 1:144260/147‑1 GCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCG > 7:288105/1‑149 CTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGC < 8:288105/149‑1 TAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGC > 7:170444/1‑125 TAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGC < 8:170444/125‑1 GCGGCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAG > 7:36468/1‑149 GCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC < 1:302090/149‑1 GCCCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC > 4:118588/1‑149 CCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC > 1:222822/1‑147 ACCTCGGCCAGTGCCGCCACCTGCCCTTGCTCGAGCTTCGGCAGTTGCAACTGGTTGCGTTCGGCGTAGTCGGCAATCAGGCCGGCATCGCCGCCTGAGCAGGCCAGCGCAATCAGCTCGCCATCTGCCGGCAAGCGTCCGCAGGCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4249014‑4249166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccCGGTGAGCTTTGTCGAAACGCTCAAGGCCGCAGCCTGCGGACGCTTGCCGGCAGATGGCGAGCTGATTGCGCTGGCCTGCTCAGGCGGCGATGCCGGCCTGATTGCCGACTACGCCGAACGCAACCAGTTGCAACTGCCGAAGCTC < NC_002947/4249191‑4249046 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |