| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4408665 = | 69 (1.370) | 4 (0.080) | 4/254 | NT | 5.8% | coding (64/297 nt) | ybcO | hypothetical protein |
| ? | NC_002947 | 4408697 = | 61 (1.230) | coding (32/297 nt) | ybcO | hypothetical protein | |||||
TCACGGCCAGCGCCTGTGGCCGAGCACCTTCTGCGTTATTGACCTTCATGGAGAAGACAACCCATGCGGCAATCGAAACTGACCAAAGCCGCCCGCGGCCGGGAGTGC‑CAGGTGCGCA‑TCCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4408791‑4408665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCGGGCGGCTTTGGTCAGTTTCGATTGCCGCATGGGTTGTCTTCTCCATGAAGGTCAATAACGCAGAAGGTGCTCGGCCACAGGCGCTGGCCGTGAGCGATGGCGAAATCTTTGTTGCGGTAGAGCGCAATGGGCGGCTCTGGGTTGGT > NC_002947/4408697‑4408844 TCACGGCCAGCGCCTGTGGCCGAGCACCTTCTGCGTTATTGACCTTCATGGAGAAGACAACCCATGCGGCAATCGAAACTGACCAAAGCCGCCCGCGCCCGGGA‑TGCGCACCTG‑GCACTCCCGGCCGCGGGCGGCTTT > 5:88688/1‑138TCACGGCCAGCGCCTGTGGCCGAGCACCTTCTGCGTTATTGACCTTCATGGAGAAGACAACCCATGCGGCAATCGAAACTGACCAAAGCCGCCCGCGCCCGGGA‑TGCGCACCTG‑GCACTCCCGGCCGCGGGCGGCTTT < 6:88688/138‑1 GCGGCCGGGAGTGC‑CAGGTGCGCA‑TCCCGGGCGCGGGCGGCTTTGGTCAGTTTCGATTGCCGCATGGG > 5:211206/1‑68 GCGGCCGGGAGTGC‑CAGGTGCGCA‑TCCCGGGCGCGGGCGGCTTTGGTCAGTTTCGATTGCCGCATGGG < 6:211206/68‑1 GCGGGCGGCTTTGGTCAGTTTCGATTTCCGCATGGGTTGTCTTCTCCATGAAGGTCAATAACGCAGAAGGTGCTCGGCCACAGGCGCTGGCCGTGAGCGATGGCGAAATCTTTGTTGCGGTAGAGCGCAATGGGCGGCTCTGGGTTGGT < 8:202034/149‑1 TCACGGCCAGCGCCTGTGGCCGAGCACCTTCTGCGTTATTGACCTTCATGGAGAAGACAACCCATGCGGCAATCGAAACTGACCAAAGCCGCCCGCGGCCGGGAGTGC‑CAGGTGCGCA‑TCCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4408791‑4408665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCGGGCGGCTTTGGTCAGTTTCGATTGCCGCATGGGTTGTCTTCTCCATGAAGGTCAATAACGCAGAAGGTGCTCGGCCACAGGCGCTGGCCGTGAGCGATGGCGAAATCTTTGTTGCGGTAGAGCGCAATGGGCGGCTCTGGGTTGGT > NC_002947/4408697‑4408844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |