| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4561311 | 58 (1.150) | 4 (0.080) | 4/242 | NT | 7.7% | coding (238/1404 nt) | PP_4048 | hypothetical protein |
| ? | NC_002947 | = 4561361 | 42 (0.890) | coding (188/1404 nt) | PP_4048 | hypothetical protein | |||||
TCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4561175‑4561311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcggTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGATCATCGGCGCTGTGGTGGGGGCGGTGGG < NC_002947/4561361‑4561217 TCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGC > 3:297072/1‑135TCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGC < 4:297072/135‑1 CCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGTGTGCCTGCGCCTGGGC > 2:26762/1‑148 GGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGC > 2:181084/1‑148 CACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGTGTGCCTGCGCCTGGGCAAGCGCTACGGGGCGGACGGCAGCCAGGCAACGCCGCAG < 1:181084/149‑1 CCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCC < 1:26762/149‑1 GGCTGCGGTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGATCATAGGCGCTGTGGTGGGGGCGG > 6:278591/1‑149 CGGTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGATCATCGGCGCTGTGGTGGGGGCGGTGGG < 2:323804/148‑1 CGGTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGATCATCGGCGCTGTGGTGGGGGCGGTGGG < 5:89349/148‑1 TCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4561175‑4561311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcggTGTGCCTGCGCCTGGGCAAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGATCATCGGCGCTGTGGTGGGGGCGGTGGG < NC_002947/4561361‑4561217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |