| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4587977 = | 54 (1.070) | 5 (0.100) | 5/246 | NT | 8.7% | intergenic (‑163/‑159) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase |
| ? | NC_002947 | 4588080 = | 53 (1.100) | intergenic (‑266/‑56) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase | |||||
CCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4588080‑4587977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCC > NC_002947/4588080‑4588226 CCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACA < 3:205532/145‑1CCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACA > 4:205532/1‑145 GGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCAT > 2:4675/1‑148 CGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCGGC > 5:131093/1‑133 CGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCGGC < 6:131093/133‑1 GGGGCCGGATCCGAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGGACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCC < 8:284389/149‑1 GGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCC > 5:87791/1‑149 CCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4588080‑4587977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCC > NC_002947/4588080‑4588226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |