| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4788341 | 63 (1.250) | 4 (0.090) | 3/240 | NT | 5.9% | coding (5499/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4788393 | 68 (1.450) | coding (5447/6525 nt) | pvdI | non‑ribosomal peptide synthetase | |||||
CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4788189‑4788341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcctgcACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGCCTTAC < NC_002947/4788393‑4788248 CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGC > 8:51585/1‑149CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGC < 6:217717/149‑1CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCC > 1:25285/1‑147CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCC < 2:25285/147‑1 CGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCC > 2:304752/1‑149 GCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTAGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTG > 6:178217/1‑149 CGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGC < 3:17228/109‑1 CGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGC > 4:17228/1‑109 ACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGC > 2:196229/1‑149 CGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGG < 1:196229/149‑1 GGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGG < 5:61811/124‑1 GGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGG > 6:61811/1‑124 CCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCT > 7:252928/1‑93 CCGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCT < 8:252928/93‑1 CGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACGAGCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGC < 1:228684/149‑1 CGCCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACTGCCCACGACTGCGCGCC < 6:129453/149‑1 CCTGCACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGCCT > 5:109075/1‑148 CACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGCCTTAC < 6:109075/147‑1 CACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGCCTTAC < 7:281565/147‑1 CCGGCCAGCACCCGGCCGATCGGCATCACCGGTGGCAGCGCCTGCGCCGTGGCACCTAGGTAAGGCGCGCAGTCGTGGGCGGTAACCGTGACGGTCGCCTCAGTCGGGCCGTAGGTATTGAGCAGCGTTACATGGCCAAGGCCCGCCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4788189‑4788341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcctgcACCAGTTTCACGCCGGCGGCGAAGCCATGCCGCCGGAGGGCTTGCTCGCCTGGCAGGCGGCGGGCCTTGGCCATGTAACGCTGCTCAATACCTACG‑GCCCGACTGAGGCGACCGTCACGGTTACCGCCCACGACTGCGCGCCTTAC < NC_002947/4788393‑4788248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |