| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4810308 = | 62 (1.230) | 3 (0.060) | 3/244 | NT | 5.3% | coding (148/837 nt) | PP_4236 | thiol:disulfide interchange protein DsbE |
| ? | NC_002947 | 4810358 = | 49 (1.030) | coding (198/837 nt) | PP_4236 | thiol:disulfide interchange protein DsbE | |||||
CCAGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4810460‑4810308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgatGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCCGCCCGCTAGGCTGGGCGCTGTT > NC_002947/4810358‑4810501 CCAGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGC < 3:211176/149‑1CCAGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGC < 6:291909/149‑1 CAGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCC > 7:153167/1‑149 AGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCG < 2:93033/149‑1 CCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGAT > 2:276749/1‑149 CCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGAT > 8:35838/1‑148 TGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTG > 2:232701/1‑149 CATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTC < 3:11263/100‑1 CATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTC > 4:11263/1‑100 GCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCCGCCCGCTAGGCTGGGCGCT < 6:214464/147‑1 CGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCCGCCCGCTAGGCTGGGCGCTGTT > 6:254602/1‑148 CCAGCCCTGCCAGAGGGCTCCGAGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4810460‑4810308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgatGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCCGCCCGCTAGGCTGGGCGCTGTT > NC_002947/4810358‑4810501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |