| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4853842 = | 50 (0.990) | 3 (0.060) | 3/244 | NT | 5.4% | coding (1259/2076 nt) | dnaX | DNA polymerase III subunit gamma |
| ? | NC_002947 | 4853907 = | 57 (1.200) | coding (1194/2076 nt) | dnaX | DNA polymerase III subunit gamma | |||||
CTGTCGCGGCTGTGCCGGCGGAGCCTGTTGCGCAAGCCCCGCAGCTGGAGGTGCCAGCACCCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4853908‑4853842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgacAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAGCACC > NC_002947/4853907‑4854051 CTGTCGCGGCTGTGCCGGCGGAGCCTGTTGCGCAAGCCCCGCAGCTGGAGGTGCCAGCACCCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTT > 3:9581/1‑149 GTCGCGGCTGTGCCGGCGGAGCCTGTTGCGCAAGCCCCGCAGCTGGAGGTGCCAGCACCCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAG > 7:66081/1‑149 GAGCCTGTTGCGCAAGCCCCGCAGCTGGAGGTGCCAGCACCCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTC < 8:66081/149‑1 CCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAG > 3:135874/1‑148 CCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGT > 7:129405/1‑115 CCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGT < 8:129405/115‑1 CCGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGACGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAG > 2:147500/1‑148 CGCGACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAGCA < 7:128005/149‑1 GACAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAGCACC > 8:35096/1‑148 CTGTCGCGGCTGTGCCGGCGGAGCCTGTTGCGCAAGCCCCGCAGCTGGAGGTGCCAGCACCCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4853908‑4853842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgacAGGCGGTGAAAGCGCGACCGGCGCCGCAGCTGCCACCTGCCCTGCAGGATCAGCTGTGGCCTGGCTGATCCCCGTTGGCTTTAGCACCGGCTTCGGTGCGTCGTCCGTGTCTGCCGGGCGGAACGCCAGCATACGCAGCAGCACC > NC_002947/4853907‑4854051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |