| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5027544 = | 53 (1.050) | 6 (0.130) | 3/242 | NT | 11.1% | coding (854/993 nt) | ocd | ornithine cyclodeaminase |
| ? | NC_002947 | 5027594 = | 46 (0.970) | coding (904/993 nt) | ocd | ornithine cyclodeaminase | |||||
CTGGTGATTCAGTTGTTGTAGAGCAAGCCTTTGCCTGTGCTGATTGCTCTGGAAAAAGCCAGGTTCGCAATCGCTGTGTCCTGAACGCCTGTGCCGGTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5027691‑5027544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatctcACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCGATCATGTCTGAA > NC_002947/5027594‑5027741 CTGGTGATTCAGTTGTTGTAGAGCAAGCCTTTGCCTGTGCTGATTGCTCTGGAAAAAGCCAGGTTCGCAATCGCTGTGTCCTGAACGCCTGTGCCGGTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGActttt > 6:326487/1‑144CTGGTGATTCAGTTGTTGTAGAGCAAGCCTTTGCCTGTGCTGATTGCTCTGGAAAAAGCCAGGTTCGCAATCGCTGTGTCCTGAACGCCTGTGCCGGTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGActttt > 8:96335/1‑144 GTGAGATCGCAATGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTC < 1:17421/130‑1 GTGAGATCGCAATGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTC > 2:17421/1‑130 GTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCACCCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTGTACAACAACTGAATCAC > 3:219821/1‑147 GTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACC > 2:158955/1‑148 GTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCAC > 4:67930/1‑147 AAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCATCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAAT < 1:158955/149‑1 GATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCG < 3:122217/142‑1 GATCTCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCG > 4:122217/1‑142 TCACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCGATCATGTCTG > 7:52797/1‑148 CACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCGATCATGTCTGAA < 4:37136/149‑1 CTGGTGATTCAGTTGTTGTAGAGCAAGCCTTTGCCTGTGCTGATTGCTCTGGAAAAAGCCAGGTTCGCAATCGCTGTGTCCTGAACGCCTGTGCCGGTGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5027691‑5027544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatctcACCGGCACAGGCGTTCAGGACACAGCGATTGCGAACCTGGCTTTTTCCAGAGCAATCAGCACAGGCAAAGGCTTGCTCTACAACAACTGAATCACCAGGCAACACAATAAAACCATACCCCAATCATGAGGGATCGATCATGTCTGAA > NC_002947/5027594‑5027741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |