| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5064017 = | 57 (1.130) | 4 (0.080) | 4/242 | NT | 7.1% | coding (980/1293 nt) | PP_4461 | MFS transporter |
| ? | NC_002947 | 5064051 = | 51 (1.080) | coding (946/1293 nt) | PP_4461 | MFS transporter | |||||
GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5064171‑5064017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggtTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC > NC_002947/5064051‑5064192 GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCC < 8:291206/148‑1 GCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATC < 1:301113/149‑1 GCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATC < 2:238492/149‑1 TCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCT > 3:229315/1‑148 TGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGG > 5:314716/1‑124 TGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGG < 6:314716/124‑1 GTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACT < 4:229315/149‑1 ATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC < 7:112890/149‑1 ATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCA < 7:14454/121‑1 ATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCA > 8:14454/1‑121 GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5064171‑5064017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggtTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC > NC_002947/5064051‑5064192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |