New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5125870	57 (1.130)	3 (0.060)	3/248	NT	5.1%	coding (663/891 nt)	PP_4512	DMT superfamily permease
	?	NC_002947	= 5125884	58 (1.200)					coding (677/891 nt)	PP_4512	DMT superfamily permease

TCCGGCCGTTTGCCTGCAGTACAGGCCGCACTGTGGCAAAACCTGGTGGTGGGCCTGTGCCTGCTGCCGTTCGCAGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5125718‑5125870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgACGAACAGGCTGTGCGCCACACCCGTGCAGAAGATGCCGAGCAGGGCGATCCACAGCCAGTCCAGGGCCGCAACGTCGGCCAGGCCGGGCGCTGCGAACGGCAGCAGGCACAGGCCCACCACCAGGTTTTGCCACAGTGCGGCCTG  <  NC_002947/5125884‑5125739                                                                                                                                                                                                                                                                                                             TCCGGCCGTTTGCCTGCAGTACAGGCAGCACTGTGGCAAAACCTGGTGGTGGGCCTGTGCCTGCTGCCGTTCGCAGCGCCCGGCCTGGCCCACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGT                                                                                                                                                        >  4:83235/1‑149               TGCAGTACAGGCCGCACTGTGGCAAAACCTGGTGGTGGGCCTGTGCCTGCTGCCGTTCGCAGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCG                                                                                                                                                    <  1:222225/139‑1               TGCAGTACAGGCCGCACTGTGGCAAAACCTGGTGGTGGGCCTGTGCCTGCTGCCGTTCGCAGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCG                                                                                                                                                    >  2:222225/1‑139                                                                           AGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCGACGAACAGGCTGTGCGCCACACCC                                                                                                                            <  1:8796/103‑1                                                                           AGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCGACGAACAGGCTGTGCGCCACACCC                                                                                                                            >  2:8796/1‑103                                                                                                                              GCTCGGCATCTTCTGCACGGGTGTGGCGCACAGCCTGTTCGTCGCCACACCCGTGCAGAAGATGCCGAGCAGGGCGATCCACAGCCAGTCCAGGGCCGCAACGTCGGCCAGGCCGGGCGCTGCGAACGGCAGCAGGCACAGGCCCACCA                           >  8:123705/1‑149                                                                                                                                                       GCGACGAACAGGCTGTGCGCCACACCCGTGCAGAAGATGCCGAGCAGGGCGATCCACAGCCAGTCCAGGGCCGCAACGTCGGCCAGGCCGGGCGCTGCGAACGGCAGCAGGCACAGGCCCACCACCAGGTTTTGCCACAGTGCGGCCTG  >  1:123548/1‑149                                                                                                                                                                                                                                                                                                             TCCGGCCGTTTGCCTGCAGTACAGGCCGCACTGTGGCAAAACCTGGTGGTGGGCCTGTGCCTGCTGCCGTTCGCAGCGCCCGGCCTGGCCGACGTTGCGGCCCTGGACTGGCTGTGGATCGCCCTGCTCGGCATCTTCTGCACGGGTGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5125718‑5125870 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgACGAACAGGCTGTGCGCCACACCCGTGCAGAAGATGCCGAGCAGGGCGATCCACAGCCAGTCCAGGGCCGCAACGTCGGCCAGGCCGGGCGCTGCGAACGGCAGCAGGCACAGGCCCACCACCAGGTTTTGCCACAGTGCGGCCTG  <  NC_002947/5125884‑5125739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.