| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5518311 | 66 (1.310) | 4 (0.080) | 4/242 | NT | 6.6% | coding (270/1068 nt) | PP_4850 | membrane protein |
| ? | NC_002947 | = 5518382 | 51 (1.080) | coding (199/1068 nt) | PP_4850 | membrane protein | |||||
GCACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5518156‑5518311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaccCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCG < NC_002947/5518382‑5518241 GCACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGT > 5:91081/1‑149GCACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTCTCACGGT > 6:49129/1‑149 GCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGAC > 4:121006/1‑149 GCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGA < 5:236975/148‑1 GCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGC > 5:212855/1‑149 GAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGT < 6:212855/149‑1 TCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCA < 5:263702/139‑1 TCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCA > 6:263702/1‑139 GCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCG > 5:229773/1‑149 CCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGG < 5:155539/128‑1 CCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGG > 6:155539/1‑128 GCACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5518156‑5518311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaccCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCG < NC_002947/5518382‑5518241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |