| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5546283 = | 64 (1.270) | 5 (0.100) | 3/244 | NT | 8.4% | coding (201/747 nt) | rlmB | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| ? | NC_002947 | 5546378 = | 49 (1.030) | coding (106/747 nt) | rlmB | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB | |||||
GCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5546436‑5546283‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgtgGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCGGG > NC_002947/5546378‑5546525 GCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAG > 5:279005/1‑149GCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAA < 3:3075/148‑1 CTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGG > 2:264546/1‑149 CAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGT > 5:294255/1‑149 GCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCGAGGCCGAGCGCCGTGAGATGGATGGCTGGGTCGAAGGCGTGGCTCGCTGCGCCCTTCCGACAGGCAGATCTGCTTGACCCGCTTTGGATGGTG < 4:138766/149‑1 GCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTG > 3:138766/1‑149 GCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTG > 3:149620/1‑149 GCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTG < 4:149620/149‑1 CTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAG > 1:203475/1‑148 GTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCG > 8:24888/1‑149 TGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCGG < 1:252390/149‑1 TGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCGG < 4:232455/149‑1 GGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCGGG < 5:231067/149‑1 GCTGCAGCACCATCCAAAGCGGGTCAAGCAGATCTGGCTGTCGGAAGGGCGCAGCGAGCCACGCCTCGAAACCTTGCTGGCGCTGGCCGCGGAAAACCGCGTGCCGGTCGGCCAGGCCGAGCGCCGTGAGATGGATGCCTGGGTCGAAGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5546436‑5546283‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgtgGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGATTTTTTCCAGCTGACTCATGAATTGCTCTTGTTTTTGCGTGGAGCGCCGGACTTCGGCGGG > NC_002947/5546378‑5546525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |