| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5731590 = | 59 (1.170) | 4 (0.080) | 4/244 | NT | 6.5% | coding (966/1206 nt) | hutI | imidazolonepropionase |
| ? | NC_002947 | 5731630 = | 60 (1.260) | coding (926/1206 nt) | hutI | imidazolonepropionase | |||||
TGGCAAGCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5731744‑5731590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctgGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGCTTGCCATGGCCACGGCGTCTTCCTCT > NC_002947/5731630‑5731764 TGGCAAGCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑G > 2:85040/1‑149 AAGCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGC > 8:160982/1‑149 AGCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCT < 4:8411/149‑1 GCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTG > 1:235859/1‑149 CCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GT < 1:299622/89‑1 CCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GT > 2:299622/1‑89 TGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACC < 3:303486/124‑1 TGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACC > 4:303486/1‑124 CAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGC > 1:159540/1‑149 CCCCGGCACCTCGCCAGGGTTGAGGTCGCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGCTTGCCATGG > 5:71284/1‑149 GCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGCTTGCCATGGCCACGGCGTCTTCCTCT < 5:133275/139‑1 GCTGGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGCTTGCCATGGCCACGGCGTCTTCCTCT > 6:133275/1‑139 TGGCAAGCGCCGGCACGGTCGCCGTGCTGCTACCGGGTGCTTTCTACTTCCTGCGTGAAACCCAGCTGCCGCCAATGGATGCATTGCGCCGCCACGGGGTAAAGATTGCCCTGGCCAGCGACCTCAACCCCGGCACCTCGCCAGGGTT‑‑‑GTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5731744‑5731590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctgGCCAGGGCAATCTTTACCCCGTGGCGGCGCAATGCATCCATTGGCGGCAGCTGGGTTTCACGCAGGAAGTAGAAAGCACCCGGTAGCAGCACGGCGACCGTGCCGGCGCTTGCCATGGCCACGGCGTCTTCCTCT > NC_002947/5731630‑5731764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |