New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5772407	68 (1.350)	4 (0.080)	4/250	NT	6.1%	coding (556/2004 nt)	betT‑I	choline transporter
	?	NC_002947	= 5772451	58 (1.190)					coding (512/2004 nt)	betT‑I	choline transporter

CTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGCATCGCGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5772258‑5772407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGATG  <  NC_002947/5772451‑5772306                                                                                                                                                                                                                                                                                                          CTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGCATCGCGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGC                                                                                                                                                     >  5:297437/1‑149                                     GGACGATACTTGCATCGCGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGCCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTAC                                                                                                                 >  6:137940/1‑149                                                GCATCGCGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGC‑‑‑‑‑CCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAG                                                                                                  <  6:106828/148‑1                                                 CATCGCGCCGATGCCCAGGTTGGGCACCACGCCCAGCAGGGTGACGAAGATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGCCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGC                                                                                                     <  8:149992/149‑1                                                      CGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGCCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCG                                                                                                <  5:137940/149‑1                                                                                                                                                   CGCCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGA    >  1:158090/1‑148                                                                                                                                                   CGCCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGA    <  2:158090/148‑1                                                                                                                                                     CCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGATG  >  1:234404/1‑148                                                                                                                                                     CCACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGATG  >  6:297437/1‑148                                                                                                                                                                                                                                                                                                          CTTGCTGTGGTCCATGCCGAACAGGTATTCCAGGCCGGACGATACTTGCATCGCGCCGATGCCCAGGTTGGTCACCAGGCCCAGCAGGGTGACGAACATGCCGAAGATATCGACGGCGTTGCCGGCAGCGCCCTTGACCCAACGCTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5772258‑5772407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccACAACCAGCCGCTGGCACTGCGCTCGGCGCTGTACCCGCTGGTGGGCGAGCGTTGGGTCAAGGGCGCTGCCGGCAACGCCGTCGATATCTTCGGCATGTTCGTCACCCTGCTGGGCCTGGTGACCAACCTGGGCATCGGCGCGATG  <  NC_002947/5772451‑5772306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.