New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5880915	64 (1.270)	3 (0.060)	3/244	NT	4.4%	coding (324/1368 nt)	PP_5154	FAD‑binding oxidoreductase
	?	NC_002947	= 5880941	69 (1.450)					coding (298/1368 nt)	PP_5154	FAD‑binding oxidoreductase
Rejected: Frequency below/above cutoff threshold.

CCACTTTCAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5880761‑5880915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttgcCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACGCCGAAGAGCAAGGCCTTTATTACCCGGTGGACTTCGCTTCCAGCGGTTCCAGCCAGATTGGCGGCAATATCGGCACCAACGCCGGCGGGATCAAGGTGATTCGTTACGGT  <  NC_002947/5880941‑5880795                                                                                                                                                                                                                                                                                                                CCACTTTCAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAG                                                                                                                                                           <  8:95930/149‑1  CACTTTCAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATCCCGCAGGCGTTGGTGCCGATATTGCCGCGAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGG                                                                                                                                                          >  5:228992/1‑149     TTTCAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTT                                                                                                                                                       >  7:239459/1‑149        aAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATACCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCAGGAAGCGAACTCCACCGGGTAATAAAGGCCATGCTCTTCGGCGTAGGTTTG                                                                                                                                                      >  6:217840/2‑147                                  TACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTT                                                                                                                                                       <  7:60496/120‑1                                  TACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTT                                                                                                                                                       >  8:60496/1‑120                                            AATCACCTTGATCCCGCCGGCGTTTGTGCCGATTTTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGCCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACG                                                                                                                <  6:228992/149‑1                                                               GCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGCCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTAC                                                                                                                 <  3:49491/129‑1                                                               GCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGCCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTAC                                                                                                                 >  4:49491/1‑129                                                                                 CCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTT                                                                                                                                                       <  1:94354/73‑1                                                                                 CCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTT                                                                                                                                                       >  2:94354/1‑73                                                                                                  ACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGC                                                                                                                                                     >  5:281256/1‑58                                                                                                  ACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGC                                                                                                                                                     <  6:281256/58‑1                                                                                                                                                      GTTTGCCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACGCCGAAGAGCAAGGCCTTTATTACCCGGTGGACTTCGCTTCCAGCGGTTCCAGCCAGATTGGCGGCAATATCGGCACCAACGCCGGCGGGATCAAGGTGATTCGTTA      <  2:214818/149‑1                                                                                                                                                      GTTTGCCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACGCCGAAGAGCAAGGCCTTTATTAACCGGTGGACTTCGCTTCCAGCGGTTCCAGCCAGATTGCCGGCAATATCGCCACCAACGCCGGCGGCATCAAGGTGATTCGTTA      >  5:217840/1‑149                                                                                                                                                           CCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACGCCGAAGAGCAAGGCCTTTATTACCCGGTGGACTTCGCTTCCAGCGGTTCCAGCCAGATTGGCGGCAATATCGGCACCAACGCCGGCGGGATCAAGGTGAGTCGTTACGGT  <  6:218503/148‑1                                                                                                                                                                                                                                                                                                                CCACTTTCAGCCCGGCCACCCAGTTGCGGGTCATACCGTAACGAATCACCTTGATCCCGCCGGCGTTGGTGCCGATATTGCCGCCAATCTGGCTGGAACCGCTGGAAGCGAAGTCCACCGGGTAATAAAGGCCTTGCTCTTCGGCGTAGGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5880761‑5880915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttgcCAGCCAGGGGTCGTCACCCGCCAGCTGCAAACCTACGCCGAAGAGCAAGGCCTTTATTACCCGGTGGACTTCGCTTCCAGCGGTTCCAGCCAGATTGGCGGCAATATCGGCACCAACGCCGGCGGGATCAAGGTGATTCGTTACGGT  <  NC_002947/5880941‑5880795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.