| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5924012 | 55 (1.090) | 3 (0.060) | 3/244 | NT | 5.0% | coding (419/2874 nt) | gcvP‑II | glycine dehydrogenase |
| ? | NC_002947 | = 5924055 | 61 (1.280) | coding (376/2874 nt) | gcvP‑II | glycine dehydrogenase | |||||
TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923863‑5924012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < NC_002947/5924055‑5923909 TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCG > 5:280536/1‑149 CTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCT < 2:110989/148‑1 CCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGC < 7:91242/117‑1 CCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGC > 8:91242/1‑117 GGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGC > 8:109276/1‑149 GGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < 7:88438/149‑1 TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923863‑5924012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < NC_002947/5924055‑5923909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |