New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5924012 | 55 (1.090) | 3 (0.060) | 3/244 | NT | 5.0% | coding (419/2874 nt) | gcvP‑II | glycine dehydrogenase |
? | NC_002947 | = 5924055 | 61 (1.280) | coding (376/2874 nt) | gcvP‑II | glycine dehydrogenase |
TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923863‑5924012 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < NC_002947/5924055‑5923909 TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCG > 5:280536/1‑149 CTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCT < 2:110989/148‑1 CCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGC < 7:91242/117‑1 CCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGC > 8:91242/1‑117 GGCCGGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGC > 8:109276/1‑149 GGCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < 7:88438/149‑1 TCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGAGCAGCGAGGCATTGGCCAGAGGCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923863‑5924012 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggCTGGAGGCGCTGCTGAACTTCCAGCAAATGGTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTC < NC_002947/5924055‑5923909 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |