New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5942349	64 (1.270)	5 (0.100)	5/246	NT	8.1%	coding (166/462 nt)	PP_5209	hypothetical protein
	?	NC_002947	= 5942382	53 (1.100)					coding (133/462 nt)	PP_5209	hypothetical protein

GGTGAACAGTGCCACCAGCTGGTTACGGATCAGCGGTTCGTGGTGCTTTACCGTCTTGGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5942200‑5942349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagggGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATGCGCTCGACGGCAGCCCGCGGCTGCGCGTGTACAAGGCTGACGTGGCCCTGCGCGTGACGGGCGACGAAGCGGCCAAGACGGTAAAGCACCAC  <  NC_002947/5942382‑5942239                                                                                                                                                                                                                                                                                                        GGTGAACAGTGCCACCAGCTGGTTACGGATCAGCGGTTCGTGGTGCTTTACCGTCTTGGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGG                                                                                                                                                   >  4:188962/1‑149                                          GGTGCTTTACCGTCTTGGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCG                                                                                                          >  2:26036/1‑149                                            TGCTTTACCGTCTTGGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTT                                                                                                        <  1:26036/149‑1                                                          GGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATG                                                                                              <  7:111870/145‑1                                                          GGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATG                                                                                              >  8:111870/1‑145                                                          GGCCGCTTCGGCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAAGGAAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATGCGC                                                                                           <  7:105252/148‑1                                                                                                                                                  AAGGGGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATGCGCTCGACGGCAGCCCGCGGCTGCGCGTGTACAAGGCTGACGTGGCCCTGCGCGTGACGGGCGACGAAGCGGCCAAGACGGTAAAGCACCAC  <  2:30391/149‑1                                                                                                                                                                                                                                                                                                        GGTGAACAGTGCCACCAGCTGGTTACGGATCAGCGGTTCGTGGTGCTTTACCGTCTTGGCCGCTTCGTCGCCCGTCACGCGCAGGGCCACGTCAGCCTTGTACACGCGCAGCCGCGGGCTGCCGTCGAGCGCATAGTTGCCAACGAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5942200‑5942349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagggGTGCCCAAGGTCGCCTACATCAGTCTGAGCCCGCCCTTCGTTGGCAACTATGCGCTCGACGGCAGCCCGCGGCTGCGCGTGTACAAGGCTGACGTGGCCCTGCGCGTGACGGGCGACGAAGCGGCCAAGACGGTAAAGCACCAC  <  NC_002947/5942382‑5942239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.