New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5976554 | 63 (1.250) | 3 (0.060) | 3/242 | NT | 4.6% | coding (355/1491 nt) | yifB | ATP‑dependent chelatase |
? | NC_002947 | = 5976597 | 65 (1.380) | coding (398/1491 nt) | yifB | ATP‑dependent chelatase | |||||
Rejected: Frequency below/above cutoff threshold. |
AGAACCTCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5976399‑5976554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccggCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGG < NC_002947/5976597‑5976450 AGAACCTCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTG > 6:63524/1‑149 CCTCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCC > 5:30449/1‑149 CTCGCCCCCGCCGACCTGTCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCC > 6:230263/1‑149 CTCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCC > 5:120847/1‑149 TCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCG > 8:297956/1‑149 TCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCG > 4:120627/1‑149 CCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCG < 5:230263/149‑1 CATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTC < 3:175021/149‑1 TCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCC < 3:40471/148‑1 GCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGG < 4:58710/149‑1 GCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGG < 5:6719/149‑1 GCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGC < 1:3595/149‑1 GCCCGGCCTGCTTCGAGTGCCGCCCGTGCCGCATGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCGGTTCGCCCAGGCATTCCTTATCGGTCAGGGTGTGAATAGGGACCTGGCCGTCGGCGGCGAGGATGACCAGGG < 8:269089/148‑1 CCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGCATGCCCAGGGCGA > 5:152530/1‑149 CGGCCTGCTTCGCGTGCCGCCAGTGCCGCACGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGAT > 4:306216/1‑149 GGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG < 1:40706/149‑1 GGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCCGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG < 5:160172/149‑1 GCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGG > 6:204441/1‑149 GCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGG > 1:264264/1‑149 AGAACCTCGCCCCCGCCGACCTGCCCAAGGATGGCGGCCGATATGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCGACGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5976399‑5976554 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccggCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGG < NC_002947/5976597‑5976450 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |