| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6068259 = | 60 (1.190) | 3 (0.060) | 3/242 | NT | 4.9% | coding (902/1341 nt) | PP_5322 | metal ion transporter |
| ? | NC_002947 | 6068374 = | 60 (1.270) | coding (1017/1341 nt) | PP_5322 | metal ion transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6068411‑6068259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggtGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGCGACACCCCACTGTTCAAGGTCGA > NC_002947/6068374‑6068517 GCACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGC > 2:40156/1‑148GCACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGG < 1:188141/146‑1GCACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGG > 2:188141/1‑146 ACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG < 4:219614/149‑1 ACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG < 7:217240/149‑1 TTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGT > 1:107043/1‑149 TTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGT > 7:93844/1‑149 TTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGT > 8:35207/1‑149 GGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG > 3:66053/1‑129 GGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG < 4:66053/129‑1 CCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG > 3:68391/1‑119 CCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAG < 4:68391/119‑1 ATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGTGATCGGCTACCTGACCATGGAAGACGTGCTG > 2:122288/1‑149 CCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAG > 5:220910/1‑149 TGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCG < 6:220910/147‑1 AAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGCGACACCCCACTGTTCAAGGTCta < 5:86827/149‑3 AAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGCGACACCCCACTGTTCAAGGTCGA < 4:96733/149‑1 AAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGC < 3:201317/126‑1 AAGGTGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGC > 4:201317/1‑126 GCACTTCCAGCACGTCTTCCATGGTCAGGTAGCCGATCACCTTGCCATCGGCTTCCTCGACCAGCACGAAGTGCGCGCCGCCCTTACGGAACTGCTCCAGCAACTGTGCCAGCGGCATGTGCCGCGACACGCGTTCGAGTGGCCGGGCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6068411‑6068259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggtGATCGGCTACCTGACCATGGAAGACGTGCTGGAAGTGCTGGTAGGCGACATCCAGGACGAGCACCGCAAGACCGAGCGTGGCATTCTTGCCTACCAGCCGGGCAAGCTGCTGGTGCGTGGCGACACCCCACTGTTCAAGGTCGA > NC_002947/6068374‑6068517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |