| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6078328 | 51 (1.010) | 3 (0.060) | 3/246 | NT | 5.3% | coding (898/1290 nt) | PP_5330 | MFS transporter |
| ? | NC_002947 | = 6078351 | 59 (1.230) | coding (875/1290 nt) | PP_5330 | MFS transporter | |||||
GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078179‑6078328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT < NC_002947/6078351‑6078205 GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGC < 3:276720/149‑1GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGC > 8:13168/1‑149 ACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATT < 7:287487/149‑1 AGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTG < 3:39909/110‑1 AGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTG > 4:39909/1‑110 GCCTGGCCATGGTGTTGCTCAGCTTGGGCTGTATTGGTGCCGGCAGCCTGGCCGCCCGCTATGGTGCGGGCCGGGGGTTCGTGATCGGTCAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGA < 1:253472/149‑1 CCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT > 7:13168/1‑149 GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078179‑6078328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT < NC_002947/6078351‑6078205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |