New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6078328 | 51 (1.010) | 3 (0.060) | 3/246 | NT | 5.3% | coding (898/1290 nt) | PP_5330 | MFS transporter |
? | NC_002947 | = 6078351 | 59 (1.230) | coding (875/1290 nt) | PP_5330 | MFS transporter |
GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078179‑6078328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT < NC_002947/6078351‑6078205 GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGC < 3:276720/149‑1 GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGC > 8:13168/1‑149 ACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATT < 7:287487/149‑1 AGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTG < 3:39909/110‑1 AGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTG > 4:39909/1‑110 GCCTGGCCATGGTGTTGCTCAGCTTGGGCTGTATTGGTGCCGGCAGCCTGGCCGCCCGCTATGGTGCGGGCCGGGGGTTCGTGATCGGTCAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGA < 1:253472/149‑1 CCTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT > 7:13168/1‑149 GGTCACGGCATACAGCGGGAACAGCAACTCGGGACGGGTCGGCAGGCTGTGGTAGAAGACCCAGGAGCTGACCAGCAAAAGCAGGCTGCCGATCACGAACACCCGGCCCGCACCATAGCGGTCGGCCAGGCTGCCGGCACCAATACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078179‑6078328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccTGGCCATCGTGTTGCTCAGCTTCGGCTGTATTGGTGCCGGCAGCCTGGCCGACCGCTATGGTGCGGGCCGGGTGTTCGTGATCGG‑CAGCCTGCTTTTGCTGGTCAGCTCCTGGGTCTTCTACCACAGCCTGCCGACCCGTCCCGAGT < NC_002947/6078351‑6078205 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |