New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 90563260 (1.190)4 (0.080) 4/242 NT 6.3% coding (1891/2160 nt) PP_0788 hypothetical protein
?NC_002947 = 905696 62 (1.310)coding (1955/2160 nt) PP_0788 hypothetical protein

TGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTGCGCGAGTGGAG  >  NC_002947/905486‑905780
                                                                                                                                                  |                                                                                                                                                    
tGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGCAGGCCCAATCCTTGGGCGATGTGCTCGTAGAACAAGAGATTGTGCTGACGATTGCCCAAGAACCCGCCTGCGTGCCCCTCCAAACTGCCGACGGGCAGGATGCATCGCag                                                                                                                                                    >  2:212542‑M1/1‑147 (MQ=255)
       cTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTgc                                                                                                                                                   >  6:93567/1‑143 (MQ=255)
       cTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTgc                                                                                                                                                   <  5:93567/143‑1 (MQ=255)
               gTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGc                                                                                                                                     >  7:98138/1‑149 (MQ=255)
                 aaaGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGATCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAg                                                                                                                                              <  4:117072/138‑1 (MQ=255)
                 aaaGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAg                                                                                                                                              >  3:117072/1‑138 (MQ=255)
                   agagGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGc                                                                                                                                 <  6:151421/149‑1 (MQ=255)
                   agagGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGc                                                                                                                                 >  7:195979/1‑149 (MQ=255)
                   agagGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGc                                                                                                                                 <  5:223280/149‑1 (MQ=255)
                        cgcTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATc                                                                                                                            <  5:61847/149‑1 (MQ=255)
                               gAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCt                                                                                                                     <  7:171419/149‑1 (MQ=255)
                                   ggggAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGt                                                                                                                 >  2:12773/1‑149 (MQ=255)
                                    gggAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTc                                                                                                                <  7:298224/149‑1 (MQ=255)
                                              aTCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTc                                                                                                       >  8:246045/1‑148 (MQ=255)
                                               tCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTcga                                                                                                     <  6:285395/149‑1 (MQ=255)
                                                    gggCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAg                                                                                                 <  5:65960/148‑1 (MQ=255)
                                                     ggCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAgg                                                                                                <  8:178267/148‑1 (MQ=255)
                                                     ggCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGa                                                                                               >  4:246518/1‑149 (MQ=255)
                                                               tGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTg                                                                                     <  6:152401‑M2/149‑2 (MQ=255)
                                                               tGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTg                                                                                     <  5:217978‑M2/149‑2 (MQ=255)
                                                                 gTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCgg                                                                                                                          >  2:236525/1‑110 (MQ=255)
                                                                 gTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCgg                                                                                                                          <  1:236525/110‑1 (MQ=255)
                                                                      aCAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgc                                                                               <  4:119918‑M2/148‑8 (MQ=255)
                                                                       cAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcg                                                                                   <  8:130265‑M1/143‑68 (MQ=255)
                                                                       cAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCagtggctcatcctcgtcgagcacctagacccaggtgccgatacgcaggcgttgcgcctggcgcagcg                                                                                   >  7:130265‑M1/1‑76 (MQ=255)
                                                                       cAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgc                                                                               <  3:101763‑M2/147‑8 (MQ=255)
                                                                       cAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgc                                                                               <  3:12154‑M2/147‑8 (MQ=255)
                                                                        aaGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAg                                                                            >  5:150381/1‑149 (MQ=255)
                                                                        aaGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAg                                                                            >  1:82762/1‑149 (MQ=255)
                                                                         agagATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggtgcagcgctgcagcc                                                                           >  8:12013‑M1/1‑74 (MQ=255)
                                                                            gaTTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggtgcagcgctgcagcctgc                                                                        <  7:12013‑M1/149‑79 (MQ=255)
                                                                                  gCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGAt                                                                                              <  6:124322/121‑1 (MQ=255)
                                                                                  gCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGAt                                                                                              >  5:124322/1‑121 (MQ=255)
                                                                                   cTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTcgcgc                                                                  <  6:150381/148‑1 (MQ=255)
                                                                                      aCGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCAt                                                              <  7:44276/149‑1 (MQ=255)
                                                                                       cgcttGCCGCAGAACCCCCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCGGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATc                                                             <  6:224797/146‑1 (MQ=255)
                                                                                              cGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCAt                                                              <  6:92510/141‑1 (MQ=255)
                                                                                              cGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCAt                                                              >  5:92510/1‑141 (MQ=255)
                                                                                               gaagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAAc                                                                                                                                       <  2:34767/67‑1 (MQ=255)
                                                                                               gaagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAAc                                                                                                                                       >  1:34767/1‑67 (MQ=255)
                                                                                               gaagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGAcagcag                                                     <  4:12154/149‑1 (MQ=255)
                                                                                                aagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGt                                                    <  6:217978/149‑1 (MQ=255)
                                                                                                aagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGt                                                    <  8:98138/149‑1 (MQ=255)
                                                                                                aagaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGt                                                    <  1:12773/149‑1 (MQ=255)
                                                                                                 agaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgc                                                                                  >  1:196876‑M2/1‑114 (MQ=255)
                                                                                                 agaaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgc                                                                                  <  2:196876‑M2/118‑5 (MQ=255)
                                                                                                   aaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGt                                                    <  6:72678/146‑1 (MQ=255)
                                                                                                   aaCCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGt                                                    >  5:72678/1‑146 (MQ=255)
                                                                                                     cccGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAg                                               >  4:69205/1‑149 (MQ=255)
                                                                                                        gCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGAt                                                                                              <  4:9120/99‑1 (MQ=255)
                                                                                                        gCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGAt                                                                                              >  3:9120/1‑99 (MQ=255)
                                                                                                         ccTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTg                                           <  7:246045/149‑1 (MQ=255)
                                                                                                          cTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTgg                                          <  3:246518/149‑1 (MQ=255)
                                                                                                               tGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTc                                     <  8:195979/149‑1 (MQ=255)
                                                                                                               tGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTc                                     <  1:212542/149‑1 (MQ=255)
                                                                                                                 ccccTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCg                                    <  4:101763/148‑1 (MQ=255)
                                                                                                                  cccTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGc                                   >  1:50608/1‑148 (MQ=255)
                                                                                                                  cacTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGc                                   >  1:117257/3‑148 (MQ=255)
                                                                                                                    cTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGCCAGCAGTGACAGGCTGGTGTTAGCCac                                >  7:142349/1‑148 (MQ=255)
                                                                                                                       cacaCTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAacc                              <  2:50608/148‑1 (MQ=255)
                                                                                                                          acTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAaccggac                          >  2:244978/1‑149 (MQ=255)
                                                                                                                            tGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAaccggaccg                        >  8:152115/1‑149 (MQ=255)
                                                                                                                              ccGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAaccggaccgg                       <  2:82762/148‑1 (MQ=255)
                                                                                                                              ccGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAaccggaccgg                       >  7:168156/1‑148 (MQ=255)
                                                                                                                               cGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCa                     >  4:296847/1‑149 (MQ=255)
                                                                                                                                    ggCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGaaa                <  2:167445/149‑1 (MQ=255)
                                                                                                                                    ggCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGa                  >  3:163166/1‑147 (MQ=255)
                                                                                                                                     gCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAg               <  7:152115/149‑1 (MQ=255)
                                                                                                                                     gCAGGCTGCAGCGCTGCACCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatc               <  7:12013‑M2/149‑72 (MQ=255)
                                                                                                                                      cAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGt              <  3:69205/149‑1 (MQ=255)
                                                                                                                                        ggCTGCAGCGCTGCACCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctct            >  8:12013‑M2/1‑75 (MQ=255)
                                                                                                                                          cTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTgcgc          <  5:152401/149‑1 (MQ=255)
                                                                                                                                           tGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTc                                                                                                       >  7:21519/1‑55 (MQ=255)
                                                                                                                                           tGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTc                                                                                                       <  8:21519/55‑1 (MQ=255)
                                                                                                                                           tGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGt              >  2:287599/1‑144 (MQ=255)
                                                                                                                                           tGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGt              <  1:287599/144‑1 (MQ=255)
                                                                                                                                            gCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttgt         <  4:119918‑M1/148‑142 (MQ=255)
                                                                                                                                            gCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttg          <  3:101763‑M1/147‑141 (MQ=255)
                                                                                                                                            gCAGCGCagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttg          <  3:12154‑M1/147‑141 (MQ=255)
                                                                                                                                               gcgtTGCGCCTGGCGCAGCGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGAGAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTGCGCGAGTg     >  1:263425/1‑149 (MQ=255)
                                                                                                                                               gcgcagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttct                                    <  2:196876‑M1/118‑115 (MQ=255)
                                                                                                                                               gcgcagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttct                                    >  1:196876‑M1/1‑4 (MQ=255)
                                                                                                                                               gcgcTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTGCGCGAGTg     <  3:296847/149‑1 (MQ=255)
                                                                                                                                                cgcTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCTAGGTGCTCGACGAGGATGAGCCACTgcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttg          >  7:130265‑M2/1‑67 (MQ=255)
                                                                                                                                                cgcTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTgcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttg          <  8:130265‑M2/143‑77 (MQ=255)
                                                                                                                                                  cagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttgttctacca  <  6:152401‑M1/149‑149 (MQ=255)
                                                                                                                                                  cagtggctcatcctcgtcgagcacctcgacccaggtgccgatacgcaggcgttgcgcctggcgcagcgctgcagcctgcccgtcggcagtgtgcaggggcacgcaggcgggttcttcggcaatcgtcagcacaatctcttgttctacca  <  5:217978‑M1/149‑149 (MQ=255)
                                                                                                                                                  cTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTGCGCGAGTGGAg  <  4:163166/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TGCGCGCCTGCGCAGGTAAAGAGGCGCTGCCGAGCGGGGAGGGCCAATCCTTGGGCGATGTGCTGGTAGAACAAGAGATTGTGCTGACGATTGCCGAAGAACCCGCCTGCGTGCCCCTGCACACTGCCGACGGGCAGGCTGCAGCGCTGCGCCAGGCGCAACGCCTGCGTATCGGCACCTGGGTCGAGGTGCTCGACGAGGATGAGCCACTGCGCTGCAAGCTGGTCGCGCGCATCGACAGCAGTGACAGGCTGGTGTTCGCCAACCGGACCGGCATGAAAGTGCGCGAGTGGAG  >  NC_002947/905486‑905780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.