New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 229579848 (0.950)5 (0.120) 3/218 NT 9.9% intergenic (+44/+89) PP_5496/PP_2023 hypothetical protein/glutathione S‑transferase family protein
?NC_002947 = 4282188 50 (1.170)coding (1042/1089 nt) PP_3753 AraC family transcriptional regulator

GCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTC  >  NC_002947/2295653‑2295944
                                                                                                                                                 |                                                                                                                                                  
gccGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAacac                                                                                                                                                 >  8:305099/1‑149 (MQ=255)
              ggCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTg                                                                                                                                   <  7:305099/149‑1 (MQ=255)
                     gCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCa                                                                                                                            >  5:50644/1‑149 (MQ=255)
                     gCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCa                                                                                                                            >  5:45829/1‑149 (MQ=255)
                      ccacccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCTCTGCCGGTgttcgcgg                                                                                                                            <  3:257820/148‑8 (MQ=39)
                      ccacccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCg                                                                                                                                      <  8:73504/138‑1 (MQ=255)
                      ccacccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCg                                                                                                                                      >  7:73504/1‑138 (MQ=255)
                        acccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACcg                                                                                                                         >  5:288388/1‑149 (MQ=255)
                                 tACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGc                                                                                                                                  <  1:145372/131‑1 (MQ=255)
                                 tACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGc                                                                                                                                  >  2:145372/1‑131 (MQ=255)
                                      cGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAAgcgggcaccgcggtggatggcaccggctctgccggtgttcg                                                                                                           >  1:46414‑M1/1‑108 (MQ=255)
                                      cGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTcg                                                                                                           >  7:139957/1‑149 (MQ=255)
                                         gCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAAgcgggcaccgcggtggatggcaccggctctgccggtgttcgcgg                                                                                                        <  2:46414‑M1/149‑45 (MQ=255)
                                          cAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCATCGCcgg                                                                                                       >  7:282250/1‑149 (MQ=255)
                                           aGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAgcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggc                                                                                                      <  2:61720‑M1/149‑47 (MQ=255)
                                             tACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCAt                                                                                                    >  3:228077/1‑149 (MQ=255)
                                                  gcgcCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCg                                                                                               >  4:108399/1‑149 (MQ=255)
                                                            gcCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACg                                                                                     >  4:78649/1‑149 (MQ=255)
                                                             ccAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACCCg                                                                                     >  7:77782/1‑148 (MQ=255)
                                                             ccAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACgg                                                                                    <  6:288388/149‑1 (MQ=255)
                                                              cAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGa                                                                                   <  3:108399/149‑1 (MQ=255)
                                                               aaTTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGAc                                                                                  <  8:63601/149‑1 (MQ=255)
                                                               aaTTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAgcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggc                                                                                                      >  7:55969‑M1/1‑83 (MQ=255)
                                                               aaTTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAgcgggcaccgcggtggatggcaccggctctgccggtgttcgcgggc                                                                                                      <  8:55969‑M1/129‑47 (MQ=255)
                                                                 tttCCATGGGGCCCTGAGGGGCAACCACCCCCATTGCGCTGGCTTGGGTGTGGTCCTTGTGGGCGCGGGCATGCCCGCGAACACCGGCAGTGCCGGTGCCATCCCCCGCGGTGCCGGCTTCGCGGGCAGGCCCGCGCCCACACGGAccc                                                                                <  6:324303/149‑1 (MQ=21)
                                                                   tCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCAt                                                                              >  5:328675/1‑149 (MQ=255)
                                                                        gCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCAtgtg                                                                           >  7:305255/1‑147 (MQ=255)
                                                                                 aGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGt                                                                >  2:220804/1‑149 (MQ=255)
                                                                                             caccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCCCTTAGCGGGCAAGCCCGCTACCACACCGACCCAAGTGCAGCCCGATGTTTAATAACCGGa                                                    >  2:252879/1‑149 (MQ=37)
                                                                                                cacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCa                                                 <  6:165664/149‑1 (MQ=255)
                                                                                                cacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCATCGCGGGCATGCCCGCTCCCCCACGGCCCCATGTGCa                                                                         >  3:302324/1‑125 (MQ=255)
                                                                                                 acTGATCTGGCTTGTGTCAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCATACCGGCCATGCCCCCTCCCACACGGACCCAAGTGCAGCCCGAAGTTTAAACAGCCGACCAt                                                >  6:140308/1‑149 (MQ=25)
                                                                                                   tGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGAGCAGCCCGAAGTTTAATCAGCGGAACATGa                                              >  5:77186/1‑149 (MQ=255)
                                                                                                     ctCTGGCTTGGGGGAGGTCCTTGGGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGAtt                                            <  8:77782/148‑1 (MQ=255)
                                                                                                     aTCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGAcc                                                  <  5:181378/143‑1 (MQ=255)
                                                                                                     aTCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTAGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGAcc                                                  >  6:181378/1‑143 (MQ=255)
                                                                                                     aTCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAAc                                   <  8:252329/141‑1 (MQ=18)
                                                                                                     aTCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAAc                                   >  7:252329/1‑141 (MQ=18)
                                                                                                      tCTGGCTGGTGTGAGGTCCTTGTGGTAGCGGTCATGCCGGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGAtt                                            <  5:140308/148‑1 (MQ=255)
                                                                                                          gCTTGTGTGAGGTCCTTGTGGGAGGGGGCATGCCGGCTAACACCGGCAGAGCCGGTGCCATCCACCGCGGGGCCCGCTTCGCGGGAATGCCCGCTCCCACACGGAGCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCtt                                       <  6:77186/149‑1 (MQ=38)
                                                                                                          gCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGcc                                         <  1:219762/147‑1 (MQ=255)
                                                                                                          gCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGcc                                         <  1:220804/147‑1 (MQ=255)
                                                                                                              gtgtgtgtTCCTTGTGGGAGGGGGCATGCCGGCTAACACGGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGAATGCCCGCTCCAACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGaa                                    <  8:245871/148‑1 (MQ=38)
                                                                                                              gtgtgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGaa                                    <  3:78649/148‑1 (MQ=255)
                                                                                                               tgtgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAAc                                   <  8:139957/148‑1 (MQ=255)
                                                                                                                gtgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAg                                 >  5:274459/1‑149 (MQ=255)
                                                                                                                 tgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAg                                 <  6:274459/148‑1 (MQ=255)
                                                                                                                 tgAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGc                                <  8:305255/149‑1 (MQ=255)
                                                                                                                     gTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCg                                                      <  3:225796/123‑1 (MQ=255)
                                                                                                                        cTTGTGGGAGCGGGCATGCCCGCTAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGaa                          <  1:252879/148‑1 (MQ=255)
                                                                                                                        cTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGAGCCCGCGTCGCGGGCCTGCCCGCTCCCACCCGGACCCCTGTGCAGCCCGCTGTTTAATCAGCGGACCATGATTTCCTTGCACAGCTCCGAag                         >  1:250710/1‑149 (MQ=37)
                                                                                                                              ggAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAagccagc                    <  4:228077/148‑1 (MQ=255)
                                                                                                                              ggAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAagccagc                    <  6:328675/148‑1 (MQ=255)
                                                                                                                               gAGCGGGCATGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatca                  <  7:126672‑M1/149‑131 (MQ=255)
                                                                                                                               gAGCGGGCATGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggat                    >  1:87431‑M1/1‑19 (MQ=255)
                                                                                                                                aGCGGGCATGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatca                  <  2:132730‑M1/148‑131 (MQ=255)
                                                                                                                                aGCGGGCATGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggat                    >  1:132730‑M1/1‑18 (MQ=255)
                                                                                                                                     gCATGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatcaggccgg            <  6:305916‑M1/149‑137 (MQ=255)
                                                                                                                                       aTGCCCGCGAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatcaggccggca          >  3:87298‑M1/1‑11 (MQ=255)
                                                                                                                                       aTGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTc            >  5:140532/1‑147 (MQ=255)
                                                                                                                                            cgcgAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatcaggccggcaccatg     >  4:191821‑M1/1‑6 (MQ=255)
                                                                                                                                             gcgAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaatt                                                                       <  5:134997‑M1/82‑78 (MQ=255)
                                                                                                                                             gcgAAgaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaatt                                                                       >  6:134997‑M1/1‑5 (MQ=255)
                                                                                                                                               gaagaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcggg                                                            <  3:274943‑M1/91‑89 (MQ=255)
                                                                                                                                               gaagaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcggg                                                            >  4:274943‑M1/1‑3 (MQ=255)
                                                                                                                                                 agaaaccaccgcggtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacagggcacgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatcaggccggcaccatggca  >  5:10048‑M1/1‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGCCAGCCACCCCTCCAGCCAGCTC  >  NC_002947/2295653‑2295944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.