| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4647595 | 17 (0.340) | 4 (0.110) | 4/180 | NT | 22.3% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | = 4647625 | 16 (0.460) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
CCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACG > NC_002947/4647450‑4647738 | cccAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATCGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATg < 3:247036/149‑1 (MQ=255) ccAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATgg > 2:37627/1‑149 (MQ=255) gccgggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑g > 8:66691/1‑147 (MQ=255) ccgggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGGTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAg < 7:143104/149‑1 (MQ=255) ggccAGATTCTCGATGGAGTTCACCCGCTATGCAGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGACGGCCTCTTCGCGTCTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGccc > 1:126235/1‑149 (MQ=255) aGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCaaa < 7:66691/149‑1 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGcc < 5:54368/130‑1 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGcc > 6:54368/1‑130 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTgc < 8:174615/149‑1 (MQ=255) cccGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgta > 1:37627‑M2/1‑143 (MQ=255) cTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtag > 8:190187‑M2/1‑139 (MQ=255) cTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtag < 7:190187‑M2/146‑8 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg < 8:157312‑M1/149‑44 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagc < 2:31019‑M1/147‑42 (MQ=255) ccGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGACGAGCCGCTGGGAGTAAGCGGGTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcggg > 4:253620‑M2/1‑134 (MQ=255) ggCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttac > 7:234623‑M2/1‑130 (MQ=255) ccccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttaccc > 2:308108‑M2/1‑128 (MQ=255) ccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggt < 3:242170‑M1/141‑46 (MQ=255) ccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggt > 4:242170‑M1/1‑96 (MQ=255) cGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑CCTCCTACACGGTGGCC‑GCCGGCCCCAACAATGTGCGGCCCccgggaggagcggggtttaccgc < 7:162558‑M2/148‑24 (MQ=255) cgCGGTTCCCCTGTGCCGGCCTGTGCG‑GGGTAAA‑CCCGGCTCCTACTGG‑TGGCCGGCCGCCCAAAACATTGGGCGCCCCCCTGTTGGTGGGGTTTAACCCGCTAATA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTcgcccgc < 8:194833/148‑1 (MQ=255) cgggCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACTGTATGGCC‑GCAGGCCAAAACATTGTGCGCCCCCCTGTAGTAGGGGGTTTACCCGCGAAGATGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGc < 1:250460/146‑1 (MQ=255) ccGGCCTCTTCGCGGGTTAA‑CCC‑CCAACAAAAGGATGGCC‑GCCCGCCCCAACAATGTGGGCCCCCCGGTAGGGGCGGGGTTTCCCGCGAAGA‑GGCCGGCACACACCGCAACACGTTTGAATGCGGCGAGCCCGCCCGCGTCCACAGc > 2:250460/1‑147 (MQ=255) gcggtaAACCCC‑GCTCCTCCCGGgggccgcacattgttggggccggcggccaccgtgtaggagggggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccg < 7:162558‑M1/146‑126 (MQ=255) gggTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccgggg > 2:308108‑M1/1‑21 (MQ=255) gTAAA‑CCC‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcc > 7:234623‑M1/1‑19 (MQ=255) a‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccgg > 4:242170‑M2/1‑45 (MQ=255) a‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccgg < 3:242170‑M2/141‑97 (MQ=255) a‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa > 6:5795/1‑149 (MQ=255) ccc‑GCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagacccgcttactcccagcggctcgtcttgacgatgccatcggcaatgctcgccggggcctcgg > 4:253620‑M1/1‑14 (MQ=255) cc‑GCTCCTACTGGAGGCCC‑GCCGCCCAAAACTTGGGCCCCCCCCCTGTCGGCGGGGTTTAACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATg < 5:12879/149‑1 (MQ=255) cc‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca < 8:157312‑M2/149‑107 (MQ=255) cc‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTCTAGGAGCGGGTTTACCCGCGAAGC‑GGCCGGCACAGACAGCAACAGATTTCAATGCTGCTCGCCCGCCCGCTGCACCAGCTGCTTGCAGCGCTCCGCCATATg > 2:299618/1‑149 (MQ=37) gCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca < 2:31019‑M2/147‑107 (MQ=255) gCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 2:57665/1‑149 (MQ=255) gCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 1:39849/1‑149 (MQ=255) tCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcac > 3:23764/1‑148 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag < 7:190187‑M1/146‑140 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag > 8:190187‑M1/1‑7 (MQ=255) tACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcggg > 1:37627‑M1/1‑6 (MQ=255) tACAGGATGGCC‑GCACGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCAGCGAAGA‑GGCCGGCACAGCCCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCATCTTGCACCGCTCAGACAAATGCACCAcg > 2:294986/1‑149 (MQ=39) | CCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAA‑CCC‑GCTCCTACAGGATGGCC‑GCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGA‑GGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACG > NC_002947/4647450‑4647738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |