New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5786472 =47 (0.930)4 (0.100) 4/210 NT 11.1% intergenic (+15/‑116) PP_5068/trxC hypothetical protein/thioredoxin
?NC_002947 5786557 = 26 (0.630)intergenic (+100/‑31) PP_5068/trxC hypothetical protein/thioredoxin

GGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCC  >  NC_002947/5786327‑5786615
                                                                                                                                                 |                                                                                                                                               
gggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtgtg                                                                                                                                              <  6:186653/149‑1 (MQ=255)
 aacagcacatcctttttgcagcgaccgcatttcggcgcgtcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTgg                                                                                                                                             >  7:260642‑M1/145‑149 (MQ=255)
 aacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTgg                                                                                                                                             <  1:45930‑M1/5‑1 (MQ=255)
 aacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggtgcacggtttcctTGTgg                                                                                                                                             <  7:223135‑M1/5‑1 (MQ=255)
   cagcacatcctttttgcagcgaccgcttttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctacggtgttgggttcacggtttcctTGTgg                                                                                                                                             <  5:185886‑M1/5‑1 (MQ=255)
     tACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtgtg                                                                                                                                              >  4:125648/1‑144 (MQ=255)
     tACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtgtg                                                                                                                                              <  3:125648/144‑1 (MQ=255)
     tACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGc                                                                                                                                         >  7:132035/1‑149 (MQ=255)
         atcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGc                                                                                                                                     <  8:241605‑M1/13‑1 (MQ=255)
         atcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctacggtgttgggttaacggtttcctTGTGGGAGCGGGc                                                                                                                                     <  3:13145‑M1/13‑1 (MQ=255)
          tGAAGTTCGACGGCTGCACAAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGCGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTCCTCTTCCTGATTAGAGCCGAATCCTGTGGGAGCGGGCg                                                                                                                                    >  4:13314/1‑149 (MQ=255)
             tttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                 <  3:6665‑M1/17‑1 (MQ=255)
                  gcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtggggggaggggattaccagtgggtcggtcatttcatctccggtgttgggttcccggtttcctTGTGGGAGCGGGCGTGGCcgc                                                                                                                             <  3:66572‑M1/21‑1 (MQ=255)
                  gcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCcgc                                                                                                                             >  5:161826‑M1/128‑148 (MQ=255)
                  gACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                             <  6:119214/148‑1 (MQ=255)
                   cagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCcgcg                                                                                                                            <  1:267644‑M1/22‑1 (MQ=255)
                    cagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcagggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                          <  7:247586‑M1/24‑1 (MQ=255)
                    agcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                          <  1:37615‑M1/24‑1 (MQ=255)
                      gCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                                         >  7:149472/1‑148 (MQ=255)
                            ccAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCGCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCaa                                                                                                                  <  3:13314/149‑1 (MQ=255)
                             cAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                 >  6:312029/1‑149 (MQ=255)
                             cAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                 >  8:90403/1‑149 (MQ=255)
                             cAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                 >  2:267644/1‑149 (MQ=255)
                                   cTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATg                                                                                                           >  7:61771/1‑149 (MQ=255)
                                   cTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATg                                                                                                           <  7:90403/149‑1 (MQ=255)
                                      gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATgg                                                                                                          <  5:312029/147‑1 (MQ=255)
                                          ggCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCa                                                                                                    <  8:132035/149‑1 (MQ=255)
                                           gCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCAc                                                                                                   >  4:109657/1‑149 (MQ=255)
                                              tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCgg                                                                                                >  8:298487/1‑149 (MQ=255)
                                                       aCAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGcctg                                                                                       <  7:207766/149‑3 (MQ=255)
                                                          gCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTg                                                                                                                                  <  1:38729/103‑1 (MQ=255)
                                                          gCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTg                                                                                                                                  >  2:38729/1‑103 (MQ=255)
                                                            caggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTc                                                                                  <  2:22824‑M1/64‑1 (MQ=255)
                                                              gggATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTTCCCGCGAAGCAGGGAACGTGATGGATTGCACCGGCTTAGCCGGTGTTcgc                                                                                >  4:13145/1‑149 (MQ=255)
                                                                cggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCgg                                                                              >  1:22824‑M1/82‑149 (MQ=255)
                                                                     aaGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACg                                                                         >  5:177451/1‑149 (MQ=255)
                                                                        ccTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGccc                                                                      <  6:177451/149‑1 (MQ=255)
                                                                         cTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCg                                                                     <  8:61771/149‑1 (MQ=255)
                                                                            cGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTAGCCGGTGTTCGCGGGCACGCCCGCTc                                                                  <  7:298487/149‑1 (MQ=255)
                                                                            cGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGAGGCCCGGCAGCCCGGAACCGGGTAGTTTTCACCGCCTTTGCCCGTTTTAGCCGGCACCCCCGcgc                                                                  >  2:301523/1‑147 (MQ=255)
                                                                               cGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCca                                                               >  6:163710/1‑149 (MQ=255)
                                                                                gAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCcac                                                              <  5:163710/149‑1 (MQ=255)
                                                                                   cGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAg                                                           >  6:328059/1‑149 (MQ=255)
                                                                                     aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGc                                                                    <  4:2290/138‑1 (MQ=255)
                                                                                     aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGc                                                                    >  3:2290/1‑138 (MQ=255)
                                                                                     aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGCGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGc                                                                            <  6:94013/130‑1 (MQ=255)
                                                                                     aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGCGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAGGGATTGCACCGGCTTCGCCGGTGTTCGCGGGc                                                                            >  5:94013/1‑130 (MQ=255)
                                                                                                 gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGc                                                                            <  1:171952/118‑1 (MQ=255)
                                                                                                 gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGc                                                                            >  2:171952/1‑118 (MQ=255)
                                                                                                  ggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAccc                                             >  1:269763/1‑148 (MQ=255)
                                                                                                          ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGga                                    <  3:109657/149‑1 (MQ=255)
                                                                                                           cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                      >  1:203887/1‑146 (MQ=255)
                                                                                                           cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGAACCGGCTTCGCCGGTGTTCGCGGGGACGCCCGCGCCCACAAGGAAACCGAGCACCCAACACCg                                      >  6:185886/1‑146 (MQ=37)
                                                                                                            tGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                      >  3:25032/1‑145 (MQ=255)
                                                                                                             ggAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGAACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGc                                                                    >  7:266318/1‑114 (MQ=255)
                                                                                                             ggAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGAACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGc                                                                    <  8:266318/114‑1 (MQ=255)
                                                                                                              tcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                             >  4:302423‑M1/36‑104 (MQ=255)
                                                                                                              tcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                             <  3:302423‑M1/69‑1 (MQ=255)
                                                                                                                 aTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGaaa                             <  5:328059/149‑1 (MQ=255)
                                                                                                                     gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGaaa                             <  6:313662/145‑1 (MQ=255)
                                                                                                                     gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGaaa                             >  5:313662/1‑145 (MQ=255)
                                                                                                                        gcgctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccga                      <  7:122907/146‑1 (MQ=255)
                                                                                                                         ctctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGCAAACCGTGAACCCAACACCGGAGATGAAATgaccgac                     >  5:104968/1‑149 (MQ=255)
                                                                                                                              ccTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                 <  4:292034/148‑1 (MQ=255)
                                                                                                                                 gATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccgac                     <  3:305934/141‑1 (MQ=255)
                                                                                                                                  aTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGt             >  1:194701/1‑148 (MQ=255)
                                                                                                                                            aaTCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGcc  <  2:269763/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCC  >  NC_002947/5786327‑5786615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.