New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 896121	59 (1.170)	3 (0.060)	3/250	NT	5.8%	coding (294/1191 nt)	PP_0778	group 1 family glycosyl transferase
	?	NC_002947	= 896180	40 (0.820)					coding (235/1191 nt)	PP_0778	group 1 family glycosyl transferase

GAAGTTGGTGTGAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAACCCATCACTG  >  NC_002947/896037‑896328                                                                                                                                                |                                                                                                                                                     gAAGTTGGTGTGAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCt                                                                                                                                                 >  7:173105/1‑149 (MQ=255)     ttGGTGTGAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGcc                                                                                                                                             <  4:61710/149‑1 (MQ=255)       ggTGTGAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGccc                                                                                                                                            <  8:173105/148‑1 (MQ=255)           tgAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACCCCTCGCCCCACTg                                                                                                                                       >  1:127093/1‑149 (MQ=255)             aaaGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGc                                                                                                                                      >  5:252881/1‑148 (MQ=255)             aaaGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCa                                                                                                                                     >  1:90111/1‑149 (MQ=255)               aGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCaaa                                                                                                                                   <  4:137663/149‑1 (MQ=255)               aGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCaaa                                                                                                                                   >  5:46458/1‑149 (MQ=255)                   aCTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCg                                                                                                                               >  7:165615/1‑149 (MQ=255)                    cTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCgg                                                                                                                              >  7:84184/1‑149 (MQ=255)                          accGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGcc                                                                                                                        >  5:152983/1‑149 (MQ=255)                                aCCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAg                                                                                                                  <  6:119375/149‑1 (MQ=255)                                 cccccAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAAccc                                                                                                                                <  3:160331/134‑1 (MQ=255)                                 cccccAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAgc                                                                                                                 <  6:46458/149‑1 (MQ=255)                                   cccAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAgcgc                                                                                                               <  2:29804/149‑1 (MQ=255)                                     cAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGcc                                                                                                              >  5:186782/1‑148 (MQ=255)                                     cAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGcc                                                                                                              <  6:186782/148‑1 (MQ=255)                                      aGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCa                                                                                                            <  2:196163/149‑1 (MQ=255)                                          gTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCa                                                                                                        >  3:75577/1‑149 (MQ=255)                                                ccGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGca                                                                                                   >  5:183748/1‑148 (MQ=255)                                                      gTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATc                                                                                            <  4:75577/149‑1 (MQ=255)                                                                 aGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGAt                                                                                  <  8:165615/148‑1 (MQ=255)                                                                    cccAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGtt                                                                              <  8:84184/149‑1 (MQ=255)                                                                     ccAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTtg                                                                             >  4:281944/1‑149 (MQ=255)                                                                       aGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTtgtg                                                                           <  6:183748/149‑1 (MQ=255)                                                                            ccccTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGt                                                                      >  7:97766/1‑149 (MQ=255)                                                                              ccTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGAcaccgaggggccgctggggctcagcgctctacgcgcggcccgacgcctgggggtggcggtggtcagtggctttcacaccaac                                                                    <  8:248057‑M2/149‑83 (MQ=255)                                                                                   gTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGAcaccgaggggccgctggggctcagcgctctacgcgcggcccgacgcctgggggtggcggtggtcagtggctttcacaccaacttccc                                                               <  1:83001‑M2/149‑88 (MQ=255)                                                                                      gCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGcc                                                            <  6:252881/149‑1 (MQ=255)                                                                                              cagtacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGgc                                                    <  4:65551/149‑1 (MQ=255)                                                                                              cagtacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGgc                                                    >  6:214293/1‑149 (MQ=255)                                                                                                gtacaTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGAcaccgaggggccgctggggctcagcgctctacgcgcggcccgacgcctgggggtggcggtggtcagtggctttcacaccaacttcccgcagtattccggc                                                  >  2:83001‑M2/1‑49 (MQ=255)                                                                                                   caTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCgg                                                <  8:97766/148‑1 (MQ=255)                                                                                                    aTCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCATACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGgc                                              <  2:90111/149‑1 (MQ=255)                                                                                                      ccGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGccc                                                                  <  6:12271/127‑1 (MQ=255)                                                                                                      ccGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGccc                                                                  >  5:12271/1‑127 (MQ=255)                                                                                                              tGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTc                                    >  6:68334/1‑149 (MQ=255)                                                                                                                ccGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCg                                                           <  6:295634/124‑1 (MQ=255)                                                                                                                ccGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCg                                                           >  5:295634/1‑124 (MQ=255)                                                                                                                 cGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGAc                                 <  5:68334/149‑1 (MQ=255)                                                                                                                       cAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATg                           <  6:152983/149‑1 (MQ=255)                                                                                                                        aGCGGCGCAACAGCTTGTGCATCGCCACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATgg                          >  1:112506/1‑149 (MQ=255)                                                                                                                               cAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGtt                   <  3:281944/149‑1 (MQ=255)                                                                                                                                        gtgCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCaa            <  4:75980/147‑1 (MQ=255)                                                                                                                                           cATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAACCCAt       >  2:215845/1‑149 (MQ=255)                                                                                                                                            aTCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACCGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGCCCTCCTGGCCGCGTTGGCGCAACCCAt       >  5:191212/1‑148 (MQ=255)                                                                                                                                             tCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCACGTTGGCGCAACCCATCa     >  1:157225/1‑149 (MQ=255)                                                                                                                                                acaccgaggggccgctggggctcagcgctctacgcgcggcccgacgcctgggggtggcggtggtcagtggctttcacaccaacttcccgcagtattccggccagtacggcctgggcctgctggcgcgcctgctcactcactacttgcgc  >  7:248057‑M2/1‑1 (MQ=255)                                                                                                                                                acacCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAACCCATCACt   >  3:13240/1‑148 (MQ=255)                                                                                                                                                |                                                                                                                                                     GAAGTTGGTGTGAAAGCCACTGACCACCGCCACCCCCAGGCGTCGGGCCGCGCGTAGAGCGCTGAGCCCCAGCGGCCCCTCGGTGGCGATGTACAGTACATCCGGGCGCTGCCGGCGCCAGCGGCGCAACAGCTTGTGCATCGACACCTCGCCCCACTGCAAACCCGGGTAGCCCGGCAGCGCCCAGCCACGGCACAGCATCAGCTGCGGATCGTTGTGCACGTGCCCTTCGCCGGCCTGGCGCGGGCGCACCACCTCGACCTCATGGCCGCGTTGGCGCAACCCATCACTG  >  NC_002947/896037‑896328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.