New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1494705 =39 (0.770)4 (0.080) 4/246 NT 9.4% coding (166/2277 nt) PP_1306 Pyocin S‑type killer domain‑containing protein
?NC_002947 1494745 = 40 (0.830)coding (126/2277 nt) PP_1306 Pyocin S‑type killer domain‑containing protein

GTTTGTTTCATGAGCATACTTATCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGCTAGGTTTACG  >  NC_002947/1494598‑1494889
                                                                                                                                                   |                                                                                                                                                
tggcacgggacaatacgtattatctcgatgaggcgctatacatcagtgcgcaagcacctacaggtattgaactgagttttatcggtggcggtgggccgggctcaggtGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCAc                                                                                                                                                 >  7:304408‑M1/108‑149 (MQ=255)
     tttCATGAGCATACTTATCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAg                                                                                                                                            >  8:70461/1‑149 (MQ=255)
         aTGAGCATACTTATCTGAATAGTCCTTTTCGATGATTTGAAATTCATCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCg                                                                                                                                        >  1:226187/1‑149 (MQ=255)
                 aCTTATCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGACGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCccaccg                                                                                                                                >  6:269719/1‑149 (MQ=255)
                   ttATCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCccaccgcc                                                                                                                              >  8:120540/1‑149 (MQ=255)
                      tCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCccaccgccac                                                                                                                            <  7:70461/148‑1 (MQ=255)
                         gAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGa                                                                                                                         >  5:6634/1‑148 (MQ=255)
                          aaTAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGa                                                                                                                         <  1:73850/147‑1 (MQ=255)
                               tCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAAc                                                                                                                   >  5:275116/1‑148 (MQ=255)
                                ccTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACt                                                                                                                  >  8:29628/1‑148 (MQ=255)
                                        atgatTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCaa                                                                                                          >  3:247651/1‑148 (MQ=255)
                                         tgatTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTTGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATa                                                                                                        <  3:81669/149‑1 (MQ=255)
                                                    tcttctGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGc                                                                                             >  5:311886/1‑149 (MQ=255)
                                                          gTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTc                                                                                                                 >  8:100124/1‑123 (MQ=255)
                                                          gTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTc                                                                                                                 <  7:100124/123‑1 (MQ=255)
                                                          gTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTgcg                                                                                        >  4:308511/1‑148 (MQ=255)
                                                          gTCAGCACCCTACGCGTGGAAATAACCCGAGCAAAATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTAAGTTCAATACCTGTAGGTGCTTgcg                                                                                        >  7:148098/1‑148 (MQ=255)
                                                           tCAGCAGCCTACGGGTGGAAATAACCCGAGCAAAATCATTTTTGTTTGGGCTGGTGCCTAGTTGATAACCATCGCTTAGCCCCCAGCCACCTGAGACCGGCCCACCGCCACCTATAAAACTCAGTTCAATACCTGTAGGTGGTTgctc                                                                                       <  8:148098/148‑3 (MQ=255)
                                                           tCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCtt                                                                                           >  3:256125/1‑144 (MQ=255)
                                                           tCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCtt                                                                                           <  4:256125/144‑1 (MQ=255)
                                                               cACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGa                                                                                  >  3:99141/1‑149 (MQ=255)
                                                                aCCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGAt                                                                                 <  6:6634/149‑1 (MQ=255)
                                                                      cgcgTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGtata                                                                            <  8:91085/148‑1 (MQ=255)
                                                                       gcgTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAgc                                                                          >  8:171724/1‑149 (MQ=255)
                                                                         gTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCCCCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAgcgc                                                                        >  4:285657/1‑149 (MQ=255)
                                                                         gTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGt                                                                               <  8:201603/142‑1 (MQ=255)
                                                                         gTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGt                                                                               >  7:201603/1‑142 (MQ=255)
                                                                            gAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCt                                                                      <  7:120540/148‑1 (MQ=255)
                                                                               aTAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATc                                                                  <  2:226187/149‑1 (MQ=255)
                                                                               aTAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATc                                                                  >  4:95966/1‑149 (MQ=255)
                                                                                tAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCg                                                                 <  4:247651/149‑1 (MQ=255)
                                                                                   cccGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCgag                                                               >  7:230298/1‑148 (MQ=255)
                                                                                    ccGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGAt                                                                                 >  3:114718/1‑129 (MQ=255)
                                                                                    ccGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGAt                                                                                 <  4:114718/129‑1 (MQ=255)
                                                                                           atatCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGt                                                      <  6:311886/149‑1 (MQ=255)
                                                                                                        ttggGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGcc                                         <  7:29628/149‑1 (MQ=255)
                                                                                                         gtggctgggggctaagcgatggttatccacgcggcaccagccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCa                                        >  7:304408‑M2/43‑149 (MQ=255)
                                                                                                            gctgggggctaagcgatggttatccacgcggcaccagccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGAt                                                                                 <  4:69848‑M2/66‑1 (MQ=255)
                                                                                                            gctgggggctaagcgatggttatccacgcggcaccagccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGAt                                                                                 >  3:69848‑M2/40‑105 (MQ=255)
                                                                                                                      cgTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCt                           <  3:254918/149‑1 (MQ=255)
                                                                                                                         cgatggttatccacgcggcaccagccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGAt                        <  8:304408‑M2/123‑1 (MQ=255)
                                                                                                                          gATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTtctc                             >  6:20805/1‑143 (MQ=255)
                                                                                                                          gATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTtctc                             <  5:20805/143‑1 (MQ=255)
                                                                                                                          gATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGAt                        <  7:171724/148‑1 (MQ=255)
                                                                                                                                       tAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCTTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGc            >  7:72876/1‑147 (MQ=255)
                                                                                                                                          cccccAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGCTAGGt       >  8:98203/1‑149 (MQ=255)
                                                                                                                                            cccAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGCTAGGttt     <  3:308511/149‑1 (MQ=255)
                                                                                                                                                gccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGCTAGGTTTACg  >  6:46150‑M2/4‑148 (MQ=255)
                                                                                                                                                 ccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGataa                                                           <  2:185210‑M2/88‑1 (MQ=255)
                                                                                                                                                 ccACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGataa                                                           >  1:185210‑M2/3‑90 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GTTTGTTTCATGAGCATACTTATCTGAATAGTCCTTTTCGATGATTTGAAATTCTTCTGTCAGCACCCTACGCGTGGAAATAACCCGAGCAATATCATTTTTGGTTGGGCTGGTGCCGCGTGGATAACCATCGCTTAGCCCCCAGCCACCTGAGCCCGGCCCACCGCCACCGATAAAACTCAGTTCAATACCTGTAGGTGCTTGCGCACTGATGTATAGCGCCTCATCGAGATAATACGTATTGTCCCGTGCCATGTAGGTTCTCCTGATCACTACATGGGCTAGGTTTACG  >  NC_002947/1494598‑1494889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.