New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1594513	53 (1.050)	3 (0.060)	3/244	NT	5.9%	coding (910/1320 nt)	kgtP	alpha‑ketoglutarate permease
	?	NC_002947	= 1594561	45 (0.940)					coding (862/1320 nt)	kgtP	alpha‑ketoglutarate permease

GTGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTGGGGTGACGCAGCAGGGTGCGCAT  >  NC_002947/1594416‑1594708                                                                                                                                                  |                                                                                                                                                    gtgtGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATgg                                                                                                                                                   >  1:135692‑M2/1‑146 (MQ=255)    tgCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATggtggt                                                                                                                                               >  5:209031‑M2/1‑143 (MQ=255)                 ggATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATg                                                                                                                                  >  1:211907/1‑149 (MQ=255)                  gATGGGGACGGGGCACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGc                                                                                                                                 <  3:4094/149‑1 (MQ=255)                     tgggACGGAGATCTGGGTGCCGAGCACTCCGTAGGCGATCAGGATCGGACGGCTGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAAGAGGAACAGCGTGGCGGCCGAGTTGGTGGTCGAGTCACTGATtctc                                                                                                                               <  8:298611/147‑1 (MQ=255)                     ggggACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTc                                                                                                                               >  4:304505/1‑148 (MQ=255)                      gggACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCAt                                                                                                                             <  7:131774/149‑1 (MQ=255)                        gACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGc                                                                                                                           <  6:77744/149‑1 (MQ=255)                             tGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACg                                                                                                                      >  2:66054/1‑149 (MQ=255)                             tGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATAGTGGTCGAGTCACTGATGCTCCTGCCCACg                                                                                                                      >  7:227314/1‑149 (MQ=255)                              gAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTg                                                                                                                                     <  4:78686/133‑1 (MQ=255)                              gAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTg                                                                                                                                     >  3:78686/1‑133 (MQ=255)                               aaCAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACgg                                                                                                                     <  3:176981/148‑1 (MQ=255)                                aCAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGgtg                                                                                                                   <  5:184470/149‑1 (MQ=255)                                  aGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGtt                                                                                                                 <  5:149390/149‑1 (MQ=255)                                       gCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGAc                                                                                                              >  4:93821/1‑147 (MQ=255)                                            gCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGACTGCAGGCACAGGAACAGGAACAGCGTGGCGGCCGACATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGTTAt                                                                                                       >  7:219870/1‑149 (MQ=255)                                              acacCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTAttt                                                                                                     <  3:304505/149‑1 (MQ=255)                                                acCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTAtt                                                                                                      >  6:37591/1‑146 (MQ=255)                                                acCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTAtt                                                                                                      <  5:37591/146‑1 (MQ=255)                                                 ccGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTg                                                                                                  <  2:117507/149‑1 (MQ=255)                                                  cGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTg                                                                                                  >  8:277407/1‑148 (MQ=255)                                                  cGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGc                                                                                                 <  7:277407/149‑1 (MQ=255)                                                      ggCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGt                                                                                             <  1:66054/149‑1 (MQ=255)                                                       gCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATg                                                                                                                                                    >  6:271563‑M2/1‑92 (MQ=255)                                                       gCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATg                                                                                                                                                    <  5:271563‑M2/93‑2 (MQ=255)                                                       gCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACGGATGCTCCTGCCCACGGGGTTGACCAGGGATTTCTggagg                                                                                              >  8:268267/1‑143 (MQ=255)                                                           tCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAggtg                                                                                        <  3:93821/149‑1 (MQ=255)                                                           tCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAggtg                                                                                        <  2:211907/149‑1 (MQ=255)                                                                   gtaCGGCGGCCGTTCTTGTCGGACAGACCTCCGATCATCGACTGCAGGCACATGAACAGGAACAGCGTTGCGGCCGTGATGGTGGTGGAGTGAGTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTgttgtaggt                                                                                <  8:219870/147‑1 (MQ=255)                                                                   ggACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATAGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTggtgtaggt                                                                                <  8:227314/149‑1 (MQ=255)                                                                          ggcCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTggtgtagg                                                                                 <  8:22783/141‑1 (MQ=255)                                                                          ggcCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTggtgtagg                                                                                 >  7:22783/1‑141 (MQ=255)                                                                                        gACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTgccgcc                                                           >  8:216989/1‑149 (MQ=255)                                                                                          cAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATggtggtctgtccgacaagatcggccgccgtccgatcctgatcgccttcggtgtgctcggcaccctgttcaccgtccccatcctcagcaccct                                                         <  7:282833‑M2/149‑93 (MQ=255)                                                                                             accaccGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGc                                                                                                                                 >  1:44819/1‑74 (MQ=255)                                                                                             accaccGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGc                                                                                                                                 <  2:44819/74‑1 (MQ=255)                                                                                             accaccGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATgg                                                      >  6:146499/1‑149 (MQ=255)                                                                                               caccGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATggtggtctgtccgacaagatcggccgccgtccgatcctgatcgccttcggtgtgctcggcaccctgttcaccgtcc                                                                         >  8:215774‑M2/1‑52 (MQ=255)                                                                                               caccGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATggtggtctgtccgacaagatcggccgccgtccgatcctgatcgccttcggtgtgctcggcaccctgttcaccgtcc                                                                         <  7:215774‑M2/128‑77 (MQ=255)                                                                                                        tcGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAg                                                                                                           <  7:286684/85‑1 (MQ=255)                                                                                                        tcGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAg                                                                                                           >  8:286684/1‑85 (MQ=255)                                                                                                          ggCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCgacgac                                         <  7:216989/149‑1 (MQ=255)                                                                                                                  gCACTTGAACAGGATCAGCGTGGCGGCCGTGATGGTGGTCGAGTCACTGATTCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGtcatca                                 <  2:271847/149‑1 (MQ=255)                                                                                                                  gCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGtcat                                   >  6:301114/1‑147 (MQ=255)                                                                                                                    acaTGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGc                               >  6:130259/1‑149 (MQ=255)                                                                                                                          acaggaacagGGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTg                         <  8:45768/149‑1 (MQ=255)                                                                                                                            aggaacagCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTggg                       <  5:130259/149‑1 (MQ=255)                                                                                                                                  agCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGacgacg                                        >  4:143086/1‑126 (MQ=255)                                                                                                                                  agCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGacgacg                                        <  3:143086/126‑1 (MQ=255)                                                                                                                                          ggcCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTGGGGTGACGCAGCAggg         >  2:96469/1‑149 (MQ=255)                                                                                                                                          ggcCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTGGGGTGACGCAGCAggg         >  8:60593/1‑149 (MQ=255)                                                                                                                                                 aTggtggtctgtccgacaagatcggccgccgtccgatcctgatcgccttcggtgtgctcggcaccctgttcaccgtccccatcctcagcaccctgcacaccatccagacctggtggggtgcgttcttcctgatcatggccgcactgatc  >  8:282833‑M2/1‑2 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GTGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTCGAGTCACTGATGCTCATGCCCACGGTGTTGACCAGGTATTTCTGCATGTAGGTGGTGTAGGTGTAGAAGGCCAGGGTGCCGCCCATGGTCAGACCGACGACGGTCATCAGCTCCTTGGGGTGACGCAGCAGGGTGCGCAT  >  NC_002947/1594416‑1594708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.