| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2033584 = | NA (NA) | 4 (0.080) | 4/244 | NT | 100% | coding (1065/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2033613 = | 0 (0.000) | coding (1094/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
AACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGTTGATTCCGGCCGATTTCAT > NC_002947/2033465‑2033742 | cggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttcaccggggtaccgtcttgcagcacgctcttgccgttggattccatgtccagct > 3:208097‑M2/149‑149 (MQ=255)cggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttcaccggggtaccgtcttgcagcacgctcttgccgttggattccatgtccagct > 6:331301‑M2/149‑149 (MQ=255) ggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttcaccggggtaccgtcttgcagcacgctcttgccgttggattccatgtccagctg > 3:2809‑M2/148‑149 (MQ=255) ggaatcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttcaccggggtaccgtcttgcagcacgctcttgccgttggattccatgtccagctg > 7:172564‑M2/148‑149 (MQ=255) tcaactgggtgccctggtgcagcaactggtggtaggcatgctggccgttgcagcccacgccgccccagatcaccggcccggtgtcggtcttcaccggggtaccgtcttgcagcacgctcttgccgttggattccatgtccagctgctg > 6:181806‑M2/144‑148 (MQ=255) ccgtcttgcagcacgctcttgccgttggattccatgtccagcTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCAcc > 2:129554‑M2/43‑149 (MQ=255) gtcttgcagcacgctcttgccgttggattccatgtccagcTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCAcc > 8:103254‑M2/41‑147 (MQ=255) cttgcagcacgctcttgccgttggattccatgtccagcTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGTGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGt > 3:138420‑M2/39‑149 (MQ=255) gttggattccatgtccagcTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGTTGATTCCGGCCGATTTCAt < 7:103254‑M2/130‑1 (MQ=255) TGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGTTGATTCCGGCCGa < 1:164555‑M2/124‑1 (MQ=255) TGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGTTGATTCCGGCCGa > 2:164555‑M2/1‑124 (MQ=255) | AACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCGACACCGGGCCGGTGATCTGGGGCGGCGTGGGCTGCAACGGCCAGCATGCCTACCACCAGTTGCTGCACCAGGGCACCCAGTTGATTCCGGCCGATTTCAT > NC_002947/2033465‑2033742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |