New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2769383 =	42 (0.830)	5 (0.110)	5/242	NT	11.7%	coding (302/552 nt)	PP_2421	acetyltransferase
	?	NC_002947	2769426 =	36 (0.760)					coding (259/552 nt)	PP_2421	acetyltransferase

GCAAACGGCCGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGCCAC  >  NC_002947/2769282‑2769574                                                                                                                                                 |                                                                                                                                                     gCAAACGGCCGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGccc                                                                                                                                                  <  5:208048/149‑1 (MQ=255)  cAAACGGCCGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGcccc                                                                                                                                                 >  7:144995/1‑149 (MQ=255)    aaCGGCCGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCgg                                                                                                                                               >  5:304593/1‑149 (MQ=255)          cGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCcgcgc                                                                                                                                         <  3:91575/149‑1 (MQ=255)                   cAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCg                                                                                                                                >  8:218725/1‑149 (MQ=255)                    aaaGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCg                                                                                                                                >  6:173838/1‑148 (MQ=255)                         ccAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGAc                                                                                                                           >  5:214333/1‑148 (MQ=255)                            gCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATg                                                                                                                       <  3:96964/149‑1 (MQ=255)                                 tgCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGcc                                                                                                                  <  8:144995/149‑1 (MQ=255)                                 tgCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGc                                                                                                                   <  5:173838/148‑1 (MQ=255)                                    cATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCg                                                                                                                 >  7:77064/1‑147 (MQ=255)                                       aGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGtt                                                                                                            >  7:282155/1‑149 (MQ=255)                                          gcCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGcc                                                                                                         <  7:218725/149‑1 (MQ=255)                                               ggCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACAt                                                                                                    <  8:77064/149‑1 (MQ=255)                                                  cACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATgcg                                                                                                 >  2:122416/1‑149 (MQ=255)                                                                     accGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCAtt                                                                              <  6:304593/149‑1 (MQ=255)                                                                          gTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCt                                                                         >  7:250964/1‑149 (MQ=255)                                                                              aaCTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTg                                                                       >  6:19869/1‑147 (MQ=255)                                                                              aaCTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTg                                                                       <  5:19869/147‑1 (MQ=255)                                                                              aaCTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGa                                                                      <  3:89119/148‑1 (MQ=255)                                                                              aaCTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAg                                                                     >  6:135720/1‑149 (MQ=255)                                                                                cTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGt                                                                   <  8:282155/149‑1 (MQ=255)                                                                                             aaGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAg                                                      <  8:157247/149‑1 (MQ=255)                                                                                                       ggcgcgcttgatgtgcgagcactcgcaaaagctggcgcgccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGTCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCa                                            >  1:141143‑M2/43‑149 (MQ=255)                                                                                                        gcgcgcttgatgtgcgagcactcgcaaaagctggcgcgccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCa                                                                                            >  5:188987‑M2/42‑100 (MQ=255)                                                                                                        GCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGa                                                                      >  2:268322‑M1/1‑122 (MQ=255)                                                                                                        GCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGa                                                                      <  1:268322‑M1/122‑1 (MQ=255)                                                                                                        GCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCAt                                           <  4:261929‑M1/149‑1 (MQ=255)                                                                                                         cgcgcttgttgggcgagcactcgcaaaagcgggcgcgccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGTCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCAtc                                          <  2:141143‑M2/109‑1 (MQ=255)                                                                                                          gcgcttgatgtgcgagcactcgcaaaagctggcgcgccaCGCACCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCAtct                                         >  4:73585‑M2/40‑149 (MQ=255)                                                                                                              cAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCTGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGa                                                                      >  4:182087/1‑116 (MQ=255)                                                                                                              cAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGa                                                                      <  3:182087/116‑1 (MQ=255)                                                                                                               aGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCttcttc                                    <  5:135720/149‑1 (MQ=255)                                                                                                                gCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTggg                                                                           >  6:162498/1‑109 (MQ=255)                                                                                                                 cTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCgg                                  <  8:250964/149‑1 (MQ=255)                                                                                                                 atgtgcgagcactcgcaaaagctggcgcgccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCg                                   <  3:73585‑M2/116‑1 (MQ=255)                                                                                                                  ttttGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGc                                 <  6:214333/149‑1 (MQ=255)                                                                                                                        gAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCcagcag                           >  6:172659/1‑149 (MQ=255)                                                                                                                        gAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCcagcag                           >  4:121829/1‑149 (MQ=255)                                                                                                                            gCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCgtg                       >  3:70835/1‑149 (MQ=255)                                                                                                                              tCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGaa                                                           <  1:279508/111‑1 (MQ=255)                                                                                                                              tCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGaa                                                           >  2:279508/1‑111 (MQ=255)                                                                                                                              tCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCGCGCCATCTTCTTCGGCCAGCAGCGtgtg                     >  3:224/1‑149 (MQ=255)                                                                                                                                 cacaTCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCaa                  <  3:121829/149‑1 (MQ=255)                                                                                                                                 cacaTCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCaa                  <  5:172659/149‑1 (MQ=255)                                                                                                                                       aaGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAg            <  3:261929/149‑1 (MQ=255)                                                                                                                                           gcgccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTc         >  8:227478‑M2/7‑148 (MQ=255)                                                                                                                                              ccaCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGc     <  1:122605‑M2/146‑1 (MQ=255)                                                                                                                                               caCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCGACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGcc    >  1:210729‑M2/3‑149 (MQ=255)                                                                                                                                               caCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGc     >  2:176484‑M2/3‑148 (MQ=255)                                                                                                                                               caCGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGc     >  6:124879‑M2/3‑148 (MQ=255)                                                                                                                                                 cGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGCcac  <  7:227478/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     GCAAACGGCCGACTGTTTCAAAGCCCAGCTTGTGCCATAGCGCCACGGCCACTTCGTTGCTGGCTACCACCGAGTTGAACTGCAATGCCAGAAAGCCTTCCTGGCGCGCCAGCTTTTGCGAGTGCTCGCACATCAAGCGCGCCACGCCCCGGCCGCGCGCCTGTTCGCAGACCATGTAGCCGCAGTTGCCCACATGCGCACCAGGCCCGGCAGCATTGGGCTTGAGGTAATACGAACCCAGTAGCTCGCCATCTTCTTCGGCCAGCAGCGTGTGCAAGGGCAGCTCCAGCCAC  >  NC_002947/2769282‑2769574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.