New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5052821 = | 56 (1.110) | 6 (0.120) | 5/246 | NT | 10.3% | coding (1630/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding protein |
? | NC_002947 | 5052845 = | 51 (1.060) | coding (1606/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding protein |
TCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGAT > NC_002947/5052697‑5052987 | tCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAAtctc < 5:206205/149‑1 (MQ=255) tgaatctgttgctcgagttgcaacaagagctgggcttgggcttcatattcattagccatgacatggcagtagttgagcgtgtgagccaccgagtggcggtgatgtacatgggggaaatagtcgAGATTGCGGCACGAGGCCCAATCTCg > 3:302460‑M1/124‑149 (MQ=255) aTGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTGCTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGa < 8:2136/149‑1 (MQ=255) aTGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGa > 3:169895/1‑149 (MQ=255) aatctgttgctcgagttgcaacaagagctgggcttgggcttcatattcattagccatgacatggcagtagttgagcgtgtgagccaccgagtggcggtgatgtacatgggggaaatagtcgAGATTGCGGCACGAGGCCCAATCTCGa > 7:258145‑M1/122‑148 (MQ=255) gcTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTAt > 6:198368/1‑149 (MQ=255) aCGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTGAAGATTGCGGCACGACGCACAATCTCGAATATTTaccc > 6:225736/1‑148 (MQ=255) ttCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGTGTCAGGAATAGGTACTGCGTCAATCAAACGGCTTGTATAGGTATGTTTAGGATCGTTAAAGATTGAGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTAc < 5:267799/149‑1 (MQ=255) gTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGc < 8:36314/149‑1 (MQ=255) cGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACt > 7:45056/1‑149 (MQ=255) gCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTcc > 4:272318/1‑126 (MQ=255) gCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTcc < 3:272318/126‑1 (MQ=255) gCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCg > 7:240198/1‑149 (MQ=255) acTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATCTTTAGGATCGTTGAAGATTGCGGACCGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCt < 5:225736/149‑1 (MQ=255) cTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTc < 4:169895/149‑1 (MQ=255) cTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCacac < 2:211/149‑1 (MQ=255) ttcattagccatgacatggcagtagttgagcgtgtgagccaccgagtggcggtgatgtacatgggggaaatagtcgAGATTGCGGCACGAGGCCCAATCTCGa < 1:34952‑M1/27‑1 (MQ=255) ttcattagccatgacatggcagtagttgagcgtgtgagccaccgagtggcggtgatgtacatgggggaaatagtcgAGATTGCGGCACGAGGCCCAATCTCGa > 2:34952‑M1/77‑103 (MQ=255) gCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTAc > 3:139115/1‑116 (MQ=255) gCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTAc < 4:139115/116‑1 (MQ=255) tGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCa > 3:134642/1‑149 (MQ=255) tGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATAACAGCCACTCGGTGGCTCACACGCTCAACTACTGCCa > 7:237364/1‑149 (MQ=255) cAGGGTCAGTAATAGGTACTGCGTTAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGGGGCTCACACTCTCAACTACTGCCAt < 6:276550/148‑1 (MQ=255) aGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCGCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGc < 1:249234/149‑1 (MQ=255) gAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTccccc < 4:146108/92‑1 (MQ=255) gAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTccccc > 3:146108/1‑92 (MQ=255) gAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCt > 1:46861/1‑148 (MQ=255) gAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCt > 4:273335/1‑148 (MQ=255) gAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCt > 8:300197/1‑148 (MQ=255) aTAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAAt > 6:145379/1‑149 (MQ=255) aTAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAAt < 3:273335/149‑1 (MQ=255) aTAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAAt < 5:198368/149‑1 (MQ=255) gTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTTCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGaa > 1:84943/1‑148 (MQ=255) gTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGaa > 6:153436/1‑148 (MQ=255) cTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATAACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATg < 8:237364/149‑1 (MQ=255) aatcaaACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGaagccc < 5:153436/148‑1 (MQ=255) gtgtATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATg > 8:286885/1‑125 (MQ=255) gtgtATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATg < 7:286885/125‑1 (MQ=255) gtgtATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAata > 4:225094/1‑129 (MQ=255) gtgtATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAata < 3:225094/129‑1 (MQ=255) ataGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCttgt < 7:180357/148‑1 (MQ=255) ataGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCttgt > 8:180357/1‑148 (MQ=255) taGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCttgttg < 7:300197/149‑1 (MQ=255) taGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCttgtt < 2:46861/148‑1 (MQ=255) ggATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCACCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCa > 5:212651/1‑148 (MQ=255) aTGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCAt > 6:279223/1‑102 (MQ=255) aTGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCAt < 5:279223/102‑1 (MQ=255) tAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAg < 8:45056/148‑1 (MQ=255) gATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCaa > 4:6836/1‑148 (MQ=255) ttAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAAc > 6:239282/1‑135 (MQ=255) ttAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAAc < 5:239282/135‑1 (MQ=255) ttAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGAt > 8:177422/1‑148 (MQ=255) tcgagattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGaa < 1:34952‑M2/76‑1 (MQ=255) tcgagattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGaa > 2:34952‑M2/28‑103 (MQ=255) tcgagattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGAtt > 7:258145‑M2/28‑148 (MQ=255) cgagattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTca > 3:302460‑M2/27‑149 (MQ=255) aaaGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTca > 4:101100/1‑149 (MQ=255) gattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTg < 5:1783‑M2/37‑1 (MQ=255) gattgggcctcgtgccgcaatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTg > 6:1783‑M2/24‑60 (MQ=255) cGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCAt < 7:94224/84‑1 (MQ=255) cGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCAt > 8:94224/1‑84 (MQ=255) cGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCACCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTg < 6:212651/148‑1 (MQ=255) cACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACt > 6:197852/1‑149 (MQ=255) cGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACttt < 3:6836/149‑1 (MQ=255) aGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTa < 2:84943/149‑1 (MQ=255) caatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTa < 5:308131‑M2/138‑1 (MQ=255) caatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTa > 6:308131‑M2/7‑144 (MQ=255) caatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGa > 5:172257‑M2/7‑148 (MQ=255) caatctCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGAt < 5:145379‑M2/143‑1 (MQ=255) | TCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCGGCACGAGGCCCAATCTCGACTATTTCCCCCATGTACATCACCGCCACTCGGTGGCTCACACGCTCAACTACTGCCATGTCATGGCTAATGAATATGAAGCCCAAGCCCAGCTCTTGTTGCAACTCGAGCAACAGATTCACAATTTGGACTTTTACCGAT > NC_002947/5052697‑5052987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |