New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5175476 =	58 (1.150)	4 (0.080)	4/244	NT	7.9%	coding (279/945 nt)	PP_4551	alpha/beta family hydrolase
	?	NC_002947	5175535 =	39 (0.820)					coding (338/945 nt)	PP_4551	alpha/beta family hydrolase

GGCCACGGGCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGC  >  NC_002947/5175390‑5175681                                                                                                                                                   |                                                                                                                                                    ttggtagttggaaccgctaaggatcgccccgtgcaggctgccactgtgatgcagcaggtacgcctgggcgatgtagctgcccatgcTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCAt                                                                                                                                                  >  2:97381‑M1/87‑149 (MQ=255)  gCCACGGGCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATg                                                                                                                                                 <  1:111969/149‑1 (MQ=255)  gCCACGGGCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATg                                                                                                                                                 <  3:166981/149‑1 (MQ=255)   ccACGGGCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATgg                                                                                                                                                >  5:195471/1‑149 (MQ=255)       gggCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACATTCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCa                                                                                                                                             <  1:245534/149‑1 (MQ=255)                 ccGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCAGGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGcc                                                                                                                                  >  3:176180/1‑149 (MQ=255)                     aCTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑gg                                                                                                                             >  7:75542/1‑149 (MQ=255)                      cTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGc                                                                                                                            <  8:75542/149‑1 (MQ=255)                         ggCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCg                                                                                                                           <  8:157790/147‑1 (MQ=255)                                  ggCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACctgctg                                                                                                                  <  7:288961/147‑1 (MQ=255)                                   gCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCAt                                                                                                               <  2:309335/149‑1 (MQ=255)                                   gCCTGTTCGCCCGCCATCATGGATGGAATCCCGTGGTCAATGACCTGGGCTGTGTGGCCCAGCACA‑TCGGCCAGCAGTACCCGTCCACCCCGCTCTTCCTGATCCGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCtgctgcct                                                                                                               >  6:85384/1‑147 (MQ=255)                                       gTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTTTGGCCCAGCACA‑TCGGCCAGCAGTTACCGTGCACGCCGCTGTTCCTGTACGGCCACAGCATGGGCAGCTACATCGCCCA‑CGCGTACATGCTGCATca                                                                                                             >  5:10091/1‑147 (MQ=255)                                        ttCGCCCGCCATCTTGGCTGGTATGCCGTGGTCAATGACCTGGTGTGGGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGGACGCCGCTGTTGCTGTTGGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATcaca                                                                                                           <  6:10091/148‑1 (MQ=255)                                           gcccgccATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTg                                                                                                        <  3:106135/148‑1 (MQ=255)                                            cccgccATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCATGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGc                                                                                                      <  4:176180/149‑1 (MQ=255)                                             ccgccATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCa                                                                                                     <  7:92163/149‑1 (MQ=255)                                                                     ggTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCg                                                                             >  1:36747/1‑149 (MQ=255)                                                                        cAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACctg                                                                                                                     >  5:320803/1‑106 (MQ=255)                                                                        cAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACctg                                                                                                                     <  6:320803/106‑1 (MQ=255)                                                                         aaTGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGtt                                                                          <  3:294202/148‑1 (MQ=255)                                                                               cTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTa                                                                   >  2:249496/1‑149 (MQ=255)                                                                                tGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTa                                                                   >  8:199921/1‑148 (MQ=255)                                                                                    gtgtgtGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAAc                                                              >  6:289576/1‑149 (MQ=255)                                                                                    atgctgtggccgaacaggaacagcggcgtgcacgggaactgctggccgatgtgctgggccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCaa                                                               >  2:97381‑M2/64‑149 (MQ=255)                                                                                     tgtgtgGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAg                                                                               <  1:63095/131‑1 (MQ=255)                                                                                     tgtgtgGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAg                                                                               >  2:63095/1‑131 (MQ=255)                                                                                        tgtggccgaacaggaacagcggcgtgcacgggaactgctggccgatgtgctgggccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACgggg                                                                                         <  4:61763‑M2/60‑1 (MQ=255)                                                                                        tgtggccgaacaggaacagcggcgtgcacgggaactgctggccgatgtgctgggccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCgg                                                           >  2:277637‑M2/60‑149 (MQ=255)                                                                                           GCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCg                                                        >  1:249496‑M1/1‑148 (MQ=255)                                                                                            CCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTg                                                      >  4:157940‑M1/1‑149 (MQ=255)                                                                                             CCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGc                                                     <  8:52383‑M1/149‑1 (MQ=255)                                                                                               aGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTg                                                   >  8:242860/1‑149 (MQ=255)                                                                                                    a‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCtt                                                                                 <  5:43779/114‑1 (MQ=255)                                                                                                    a‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCtt                                                                                 >  6:43779/1‑114 (MQ=255)                                                                                                           cagcagTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGt                                                  >  7:117765/1‑139 (MQ=255)                                                                                                           cagcagTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGt                                                  <  8:117765/139‑1 (MQ=255)                                                                                                                 ttCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCt                                  >  3:177979/1‑149 (MQ=255)                                                                                                                    ccGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGa                                <  5:289576/148‑1 (MQ=255)                                                                                                                     cGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGAtt                              >  8:23450/1‑149 (MQ=255)                                                                                                                        gCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTa                                                                   >  5:63913/1‑109 (MQ=255)                                                                                                                        gCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTa                                                                   <  6:63913/109‑1 (MQ=255)                                                                                                                         cACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGccc                          >  3:285800/1‑149 (MQ=255)                                                                                                                          aCGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGc                                   >  6:272196/1‑139 (MQ=255)                                                                                                                          aCGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGGTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGc                                   <  5:272196/139‑1 (MQ=255)                                                                                                                             ccgcTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCt                      <  4:177979/149‑1 (MQ=255)                                                                                                                              cgcTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCAGGGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCt                      >  1:224223/1‑149 (MQ=255)                                                                                                                                ctgttcctgttcGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGa                   <  6:195471/149‑1 (MQ=255)                                                                                                                                     tgtgctgggccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCt              <  1:277637‑M2/135‑1 (MQ=255)                                                                                                                                             gccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCt              <  2:156148‑M2/135‑1 (MQ=255)                                                                                                                                             gccacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCt              >  1:156148‑M2/7‑141 (MQ=255)                                                                                                                                               cacaGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAggg    <  7:23450‑M2/145‑1 (MQ=255)                                                                                                                                                   gCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGc  >  7:129513/1‑147 (MQ=255)                                                                                                                                                   gCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGc  <  8:129513/147‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GGCCACGGGCGCACTGCCGAACTGGGCAACCTCGGCCTGTTCGCCCGCCATCATGGCTGGAATGCCGTGGTCAATGACCTGGGGTGTGTGGCCCAGCACA‑TCGGCCAGCAGTTCCCGTGCACGCCGCTGTTCCTGTTCGGCCACAGCATGGGCAGCTACATCGCCCA‑GGCGTACCTGCTGCATCACAGTGGCAGCCTGCACGGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGC  >  NC_002947/5175390‑5175681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.