New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5255902 =	51 (1.010)	4 (0.080)	4/244	NT	8.2%	coding (432/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
	?	NC_002947	5255949 =	41 (0.860)					coding (479/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase

CACGTCGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTGGAGTTC  >  NC_002947/5255804‑5256091                                                                                                                                                  |                                                                                                                                               cACGTCGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTg                                                                                                                                               >  1:119148/1‑147 (MQ=255)   cGTCGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGa                                                                                                                                           <  6:135900/149‑1 (MQ=255)    gTCGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGaa                                                                                                                                          >  3:220692/1‑149 (MQ=255)    acccccttccttgaggatcagcagcccgggcaggataccgttcacacgcaccttgggcgcatatttttcggcgaatgacagcaccatgttctgcaGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGa                                                                                                                                           >  5:163772‑M1/96‑148 (MQ=255)      cGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACa                                                                                                                                        >  1:28228/1‑149 (MQ=255)      cGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACa                                                                                                                                        >  3:286713/1‑149 (MQ=255)        aaGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATg                                                                                                                                      <  3:111431/149‑1 (MQ=255)               cTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGt                                                                                                                               >  8:30249/1‑149 (MQ=255)                tACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGt                                                                                                                                    <  1:137753/143‑1 (MQ=255)                tACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGt                                                                                                                                    >  2:137753/1‑143 (MQ=255)                  ggatcagcagcccgggcaggataccgttcacacgcaccttgggcgcatatttttcggcgaatgacagcaccatgttctgcaGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTg                                                                                                                                               >  3:89440‑M1/82‑130 (MQ=255)                  ggatcagcagcccgggcagcataccgttcacacgcaccttgggcgcatatttttcggcgaatgacagcaccatgttctgcaGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTg                                                                                                                                               <  4:89440‑M1/49‑1 (MQ=255)                     ccTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCg                                                                                                                         >  8:153741/1‑149 (MQ=255)                     ccTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCg                                                                                                                         >  4:166807/1‑149 (MQ=255)                      cTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGc                                                                                                                        >  6:154610/1‑149 (MQ=255)                         aaCCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGATATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCg                                                                                                                      >  8:152827/1‑148 (MQ=255)                         aaCCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGcc                                                                                                                       <  6:66015/147‑1 (MQ=255)                         aaCCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCg                                                                                                                      <  3:20378/148‑1 (MQ=255)                         aaCCTGGCCCTGGGCGACCTGCGGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGcc                                                                                                                       <  6:60031/147‑1 (MQ=255)                                           ctgctgGCCAAGTTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCTAGGt                                                                                                   <  4:220692/149‑1 (MQ=255)                                                 gCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCgt                                                                                               <  6:171125/147‑1 (MQ=255)                                                   cAAGGTGGAAAAGGGCGACATCTTAGACATCTGCGACGAAACCTCGTCGCGCGGCATTAAAAGCGACATGGGCTACGGCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAat                                                                                                                <  8:232019/128‑1 (MQ=255)                                                   cAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGtgtg                                                                                            >  3:154034/1‑148 (MQ=255)                                                   cAAGGTGGAAAAGGCCCACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGACGCCACCAAGGCCGCGCTGCAGAACATGGTACTGTCATTCCCCGaaaaaa                                                                                                                >  7:232019/1‑127 (MQ=255)                                                     aGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAAc                                                                                         <  4:154034/149‑1 (MQ=255)                                                        tGGAAAAGGCGGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGt                                                                                      <  3:166807/149‑1 (MQ=255)                                                            aaaGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATcc                                                                                  >  6:255540/1‑149 (MQ=255)                                                               ggCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGc                                                                               <  7:153741/149‑1 (MQ=255)                                                                gCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGcc                                                                              <  2:119148/149‑1 (MQ=255)                                                                  cGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCg                                                                            >  4:128031/1‑149 (MQ=255)                                                                         atcCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGgctgct                                                                     <  2:28228/149‑1 (MQ=255)                                                                         atcCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGgctgct                                                                     <  4:286713/149‑1 (MQ=255)                                                                           ccACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCgt                                                                                               <  7:251905/121‑1 (MQ=255)                                                                           ccACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCgt                                                                                               >  8:251905/1‑121 (MQ=255)                                                                               aTCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCt                                                               <  3:302079/149‑1 (MQ=255)                                                                               aTCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCt                                                               >  5:85370/1‑149 (MQ=255)                                                                                  tGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTc                                                              >  1:77445/1‑147 (MQ=255)                                                                                    cgacgaAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCaa                                                            <  2:77445/147‑1 (MQ=255)                                                                                          aaCCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAgggg                                                    <  6:85370/149‑1 (MQ=255)                                                                                             tctgcagcgcggccttggtggcggcgtagccgatgtggcttttactgccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGt                                                  >  5:163772‑M2/54‑148 (MQ=255)                                                                                                 cagcgcggccttggtggcggcgtagccgatgtggcttttactgccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATGCTGCCCGGGCTGCTGATcc                                                                <  4:89440‑M2/81‑1 (MQ=255)                                                                                                 cagcgcggccttggtggcggcgtagccgatgtggcttttactgccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATcc                                                                >  3:89440‑M2/50‑130 (MQ=255)                                                                                                     GCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATcc                                                                                  <  5:125482‑M1/108‑1 (MQ=255)                                                                                                     GCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATcc                                                                                  >  6:125482‑M1/1‑108 (MQ=255)                                                                                                         CAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTAcc                                     >  1:222804‑M1/1‑149 (MQ=255)                                                                                                            tAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATAAGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGc                                   >  3:89254/1‑148 (MQ=255)                                                                                                              aaaGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAg                                >  6:2950/1‑149 (MQ=255)                                                                                                                       tagccgatgtggcttttactgccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTg                       <  6:163772‑M2/122‑1 (MQ=255)                                                                                                                        cGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTg                       >  3:162973/1‑148 (MQ=255)                                                                                                                          gCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGaaa                    <  3:128031/149‑1 (MQ=255)                                                                                                                                   ccaccaAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTg           <  4:162973/149‑1 (MQ=255)                                                                                                                                    caccaAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGc          >  1:86325/1‑149 (MQ=255)                                                                                                                                      ccaAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTg        >  4:42804/1‑149 (MQ=255)                                                                                                                                        aaGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTGGa      <  7:30249/149‑1 (MQ=255)                                                                                                                                          ggCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTGGAGt    >  2:201651/1‑149 (MQ=255)                                                                                                                                           gccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCAGAAAAAGGCCTTGCTGGAGtt   <  5:154610‑M2/142‑1 (MQ=255)                                                                                                                                            ccgcgcTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTGGAGTTc  <  3:42804‑M2/143‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               CACGTCGAAGCGCCCTACCACCTCAACCTGGCCCTGGGCGACCTGCTGGCCAAGGTGGAAAAGGCCGACATCATCCACATCTGCGACGAAACCTCCTCGCGCGGCAGTAAAAGCCACATCGGCTACGCCGCCACCAAGGCCGCGCTGCAGAACATGGTGCTGTCATTCGCCGAAAAATATGCGCCCAAGGTGCGTGTGAACGGTATCCTGCCCGGGCTGCTGATCCTCAAGGAAGGGGGTGACGACGCCTACCGCCAGCAAACCCTGAAAAAGGCCTTGCTGGAGTTC  >  NC_002947/5255804‑5256091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.