| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 343,608 | G→C | 5.9% | intergenic (‑164/‑76) | PP_5439 ← / → PP_5440 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 343,608 | 0 | G | C | 5.9% | 266.2 / 3.9 | 81 | intergenic (‑164/‑76) | PP_5439/PP_5440 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (40/36); new base C (2/3); total (42/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTC > NC_002947/343462‑343755 | aGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGtt < 8:164589/149‑1 (MQ=255)aGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGtt < 8:169116/149‑1 (MQ=255) gTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGCCCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATCTtg > 5:63095/1‑149 (MQ=255) tCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTCGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTACCAGCCATGTtgg > 2:95641/1‑149 (MQ=255) gAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggctg > 1:52862/1‑149 (MQ=255) aaaGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTtggct < 2:103474/147‑1 (MQ=255) aGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCATCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 6:94020/149‑1 (MQ=255) aGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 1:297197/149‑1 (MQ=255) aGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 6:217507/149‑1 (MQ=255) aGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCAACATGGCTGGCa < 5:48697/149‑1 (MQ=255) aGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTCGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTACCAGCCATGTTGGCTGGCa < 1:95641/149‑1 (MQ=255) cgcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa < 8:66112/145‑1 (MQ=255) cgcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCa > 7:66112/1‑145 (MQ=255) cgcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCt < 2:166896/149‑1 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTg > 7:141187/1‑149 (MQ=255) gcgTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTg > 6:72923/1‑149 (MQ=255) cgTATTGAAGCGCAATTGCCCTATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCGGCTGCCAGCCAACATGGCTGGCAGcagga < 4:181954/149‑5 (MQ=255) aTTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCAc > 8:261927/1‑149 (MQ=255) ttGAAGCGCAGTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACt < 1:1766/149‑1 (MQ=255) aGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc > 5:204523/1‑149 (MQ=255) aGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc < 2:52862/149‑1 (MQ=255) gcgcAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGTTGCCAGCCATGTTGGCTGGCAGCCTGTCACTgcgc > 3:249788/1‑148 (MQ=255) aaTTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGACCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAAtt > 4:42947/1‑149 (MQ=255) ttGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCCTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCg < 7:261927/149‑1 (MQ=255) cccGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCg > 6:131803/1‑149 (MQ=255) tAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgt < 3:313354/149‑1 (MQ=255) aaCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtga < 5:131803/149‑1 (MQ=255) aCCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgag < 7:287484/149‑1 (MQ=255) cccAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagt > 5:43050/1‑149 (MQ=255) cAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtga > 5:272384/1‑149 (MQ=255) aaGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtg > 8:229337/1‑147 (MQ=255) aaGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCgtgagtg < 7:229337/147‑1 (MQ=255) gcgcgcCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCa > 2:200749/1‑149 (MQ=255) cTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTg < 8:151361/149‑1 (MQ=255) tGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACa > 6:140826/1‑148 (MQ=255) cAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTgc < 4:154762/140‑1 (MQ=255) cAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTgc > 3:154762/1‑140 (MQ=255) cAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACaaa < 3:42947/148‑1 (MQ=255) aGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagg < 8:141187/149‑1 (MQ=255) gagaTGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAggagga < 5:140826/148‑1 (MQ=255) gaTGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGt > 4:185962/1‑148 (MQ=255) aTGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCg < 1:117961/104‑1 (MQ=255) aTGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCg > 2:117961/1‑104 (MQ=255) tGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCAt < 1:200749/149‑1 (MQ=255) gTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTc > 4:129972/1‑88 (MQ=255) gTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTc < 3:129972/88‑1 (MQ=255) gTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCAt < 6:43050/148‑1 (MQ=255) gTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCAt > 6:78353/1‑148 (MQ=255) tgGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGTTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGaa < 4:249788/146‑1 (MQ=255) aTACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga < 1:223056/131‑1 (MQ=255) aTACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga > 2:223056/1‑131 (MQ=255) tACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACtttt < 6:204523/149‑1 (MQ=255) tCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTgg > 6:20508/1‑149 (MQ=255) ccAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTgg > 2:185280/1‑148 (MQ=255) cAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga > 8:34718/1‑122 (MQ=255) cAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAagga < 7:34718/122‑1 (MQ=255) aGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCa > 8:57497/1‑149 (MQ=255) gATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCAc > 3:140341/1‑149 (MQ=255) tGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTaca < 5:72923/149‑1 (MQ=255) gggCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTacac > 7:260900/1‑149 (MQ=255) cccTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTgg > 6:190403/1‑127 (MQ=255) cccTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTgg < 5:190403/127‑1 (MQ=255) cccTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGa > 5:125718/1‑149 (MQ=255) cTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACt > 7:27032/1‑116 (MQ=255) cTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACt < 8:27032/116‑1 (MQ=255) cGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATg > 3:93884/1‑149 (MQ=255) cGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATg > 6:137150/1‑149 (MQ=255) ttCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAggg > 7:280624/1‑149 (MQ=255) ctctcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGt < 8:260900/148‑1 (MQ=255) tctcCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGtt > 6:87525/1‑148 (MQ=255) ctgctgCCAGCCATGTTGGCTCGCAGCCTGTCACTgc > 1:148763/1‑37 (MQ=255) ctgcCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATcc < 6:272384/149‑1 (MQ=255) tgcCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATcc > 8:284810/1‑148 (MQ=255) tgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTAt > 6:297755/1‑146 (MQ=255) tgcCAGCCAACATGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTAt < 5:297755/146‑1 (MQ=255) ccagccaTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCaa < 5:20508/148‑1 (MQ=255) agccaTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCGGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCg > 2:164922/1‑149 (MQ=255) agccaTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCg > 3:225775/1‑149 (MQ=255) agccaTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCg < 3:185962/149‑1 (MQ=255) gccaTGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCTTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCgg > 8:266666/1‑149 (MQ=255) tGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTc > 4:19831/1‑149 (MQ=255) | AGTCTGAAAGTGCGCGTATTGAAGCGCAATTGCCCGATAAACCCAAGCGGCGCGCCTGGGCGCTGCAGCTTGAGATGTCTGTGGGATACATATCCAGATTATTCGGACCGTGGGCCCTGCGTAGCTTCTCTCCTGCTGCCAGCCATGTTGGCTGGCAGCCTGTCACTGCGCCAATTCGGCGTCCGTGAGTGATGCGCACGTTTGCGCTACAAAGGAGGAGTCATGAAGCACTTTTATCTGGTCACCCTGTACGGCTACACGGACGATGGCAGGGTTTACTATCCAACCGGTTTC > NC_002947/343462‑343755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |