| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,430,085 | G→T | 8.2% | intergenic (+38/‑146) | PP_3924 → / → PP_3925 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,430,085 | 0 | G | T | 8.2% | 216.2 / 8.4 | 73 | intergenic (+38/‑146) | PP_3924/PP_3925 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (31/36); new base T (3/3); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 | |||||||||||
TAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAC > NC_002947/4429944‑4430228 | tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCtt > 4:172131/1‑149 (MQ=255) gcggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCgg < 6:315927/149‑1 (MQ=255) cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGt < 3:172131/149‑1 (MQ=255) ggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtt > 3:16203/1‑149 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttt < 2:106912/149‑1 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGTGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt < 3:211283/149‑1 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt < 2:253337/149‑1 (MQ=255) ccGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTg > 3:169893/1‑149 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCgg > 3:59313/1‑139 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCgg < 4:59313/139‑1 (MQ=255) aCGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATTCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttt < 7:263718/143‑1 (MQ=255) gCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTg > 1:113529/1‑148 (MQ=255) gCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg < 1:196849/149‑1 (MQ=255) ccTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg > 7:142770/1‑148 (MQ=255) cTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg > 1:205100/1‑147 (MQ=255) cATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGt < 1:137997/148‑1 (MQ=255) tGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTTTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGAt < 3:232711/149‑1 (MQ=255) tGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGAt > 7:234194/1‑149 (MQ=255) ggTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATc < 8:116181/148‑1 (MQ=255) tGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccac < 1:52169/149‑1 (MQ=255) tGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccac < 4:169893/149‑1 (MQ=255) ggCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccac > 1:168814/1‑148 (MQ=255) gCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccacc < 2:168814/148‑1 (MQ=255) cGGGGTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACAcc < 4:97300/149‑1 (MQ=255) ggCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCAt > 4:273963/1‑113 (MQ=255) ggCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCAt < 3:273963/113‑1 (MQ=255) gCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGc < 6:56157/133‑1 (MQ=255) gCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGc > 5:56157/1‑133 (MQ=255) atcATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCTGTGCAGTGATCCACCAGCAACACCCTCACCTA‑ttt < 1:299357/146‑1 (MQ=255) atgatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGca < 8:234194/149‑1 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGcaca > 7:241704/1‑149 (MQ=255) tgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCt < 7:29153/99‑1 (MQ=255) tgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCt > 8:29153/1‑99 (MQ=255) gCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATgg > 7:124555/1‑149 (MQ=255) cTGTAGATGAAAATCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATggg < 8:11575/149‑1 (MQ=255) gTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTTCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTAACCTA‑TTTGGCACATGGGa > 2:183210/1‑148 (MQ=255) tCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGAc < 8:142770/148‑1 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTc > 2:84120/1‑149 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAc < 2:227374/122‑1 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTc > 8:73593/1‑148 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTc > 2:108487/1‑148 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGAACGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAc > 1:227374/1‑122 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTcc < 4:223988/147‑1 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTcc < 8:275019/147‑1 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTcc > 3:223988/1‑147 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTcc > 7:275019/1‑147 (MQ=255) aGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCCGCCACACCCTCACCTA‑TGTGGCACATGGGACGATTGTTCCAAcc > 4:196506/1‑149 (MQ=255) gctatcTGTTCCCGTCCTGTGGGCTGGGAATACCGGATGATCGAAAAACCGAACCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTACTTTGGCACATGGGACGATTGTTCCAAcc < 1:183210/144‑1 (MQ=255) cGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCt > 2:188968/1‑149 (MQ=255) cTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCg > 5:28313/1‑149 (MQ=255) gTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCCAAGCCGGACGGCTTCGGTTTTTTTTTCCCTGCATTCGGTGCAGTGATCCCCCCGCAACACCCACCACAA‑TTTTGCACAAGGGACGATTGTTACAACCCTGGCggc > 2:320899/1‑148 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc < 4:16203/149‑1 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATNCGGTGCAGTGATGCACCAACAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc > 1:101143/1‑149 (MQ=255) gTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa < 2:205100/149‑1 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc < 2:93078/141‑1 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc > 1:93078/1‑141 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGa < 1:320899/148‑1 (MQ=255) gAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATg > 4:268144/1‑113 (MQ=255) gAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATg < 3:268144/113‑1 (MQ=255) gggCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAcc < 8:241704/149‑1 (MQ=255) ggCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAccc < 1:108487/149‑1 (MQ=255) ggCTGGGAAACCCGGATGATCGAAACACCGAAGCCTGCCGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAccc < 8:238148/149‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa > 4:305425/1‑148 (MQ=255) atCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAGCATTAGATTACCCAATAGTACTTGCTTTc > 2:18255/1‑147 (MQ=255) tCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 2:113529/148‑1 (MQ=255) aaaaaaCCGAAGCCGTCAGGCTTCTGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGa < 7:31982/121‑1 (MQ=255) aaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGa > 8:31982/2‑122 (MQ=39) aaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAg > 8:20252/1‑149 (MQ=255) aCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAg > 1:40754/1‑148 (MQ=255) aCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACtt < 4:205550/133‑1 (MQ=255) aCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACtt > 3:205550/1‑133 (MQ=255) cGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa < 8:124555/149‑1 (MQ=255) aGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAc < 7:73593/149‑1 (MQ=255) | TAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTA‑TTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAC > NC_002947/4429944‑4430228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |