| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,447,843 | C→G | 7.2% | intergenic (‑279/‑43) | nicC ← / → nicX | 6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,447,843 | 0 | C | G | 7.2% | 218.7 / 6.3 | 69 | intergenic (‑279/‑43) | nicC/nicX | 6‑hydroxynicotinate 3‑monooxygenase/2,5‑dihydroxypyridine 5,6‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base C (29/35); new base G (3/2); total (32/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
TCCGGTTGATTGTTACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAAGAGCCACTACT > NC_002947/4447696‑4447988 | tCCGGTTGATTGTTACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCTCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACt < 2:286618/149‑1 (MQ=255) ttGTTACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTg > 2:294473/1‑149 (MQ=255) gTTACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTgcg > 5:223137/1‑149 (MQ=255) ttACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTgcgc < 2:196660/149‑1 (MQ=255) ccGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGccc < 5:86467/148‑1 (MQ=255) cGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCt < 4:256920/149‑1 (MQ=255) cGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCt > 1:247902/1‑149 (MQ=255) gTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTg > 6:34717/1‑149 (MQ=255) aaTACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCATGGCAGTGCC‑TGGTgctgc > 4:121071/1‑139 (MQ=255) aaTACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCATGGCAGTGCC‑TGGTgctgc < 3:121071/142‑4 (MQ=255) tACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAAc < 2:23875/149‑1 (MQ=255) cTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCATGCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAAc < 1:206610/148‑1 (MQ=255) tgtgGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGga < 2:247902/148‑1 (MQ=255) gtgGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGgag > 4:312362/1‑148 (MQ=255) aTAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAAccc > 8:249236/1‑149 (MQ=255) aTAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAAccc > 2:120653/1‑149 (MQ=255) ggTAACGTTTGAACAGATCACTTGCGCTCTCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GTCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGa < 5:98269/149‑1 (MQ=255) gTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCCCCCAGGAGAACCCCGAt > 3:46154/1‑149 (MQ=255) gTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGAt < 2:137813/149‑1 (MQ=255) gTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGAt > 5:47010/1‑149 (MQ=255) gTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGAt < 6:223137/149‑1 (MQ=255) gTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGAt < 1:26246/149‑1 (MQ=255) gAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGa < 2:223807/148‑1 (MQ=255) aaCAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAg > 5:126164/1‑148 (MQ=255) gATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATg < 6:47010/149‑1 (MQ=255) gATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATg < 4:46154/149‑1 (MQ=255) aTCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATg > 8:206479/1‑148 (MQ=255) cACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGca > 2:154083/1‑148 (MQ=255) ttGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAAc > 7:183394/1‑149 (MQ=255) ttGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACACAGGAGAACCCCGATGCCGGTGAGCAATGCACaa > 8:55904/1‑148 (MQ=255) gcgcTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGATAGTGGA‑GCACCA‑TGCACTTCCATTGTTCGCCCCAGTCAACCCCACCCAAGAGAACCCCGATGCCCGTGAGCAAAGcaca > 1:100533/1‑148 (MQ=255) gcgcTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAAc < 1:294473/147‑1 (MQ=255) tcgctGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGAcc > 2:288455/1‑148 (MQ=255) aTGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAg > 6:11913/1‑149 (MQ=255) ttttCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACg > 3:63436/1‑148 (MQ=255) tCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTAc < 5:34717/148‑1 (MQ=255) tCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACt > 7:178672/1‑149 (MQ=255) aTCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTg > 5:232508/1‑148 (MQ=255) cacaAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCt < 7:55904/148‑1 (MQ=255) cacaAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCt < 7:249236/148‑1 (MQ=255) cacaAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCt < 6:232508/148‑1 (MQ=255) acaAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGt < 3:312362/149‑1 (MQ=255) aaGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAg > 5:186312/1‑131 (MQ=255) aaGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAg < 6:186312/131‑1 (MQ=255) aaGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGCTCGAGCACGTACTGAAGCTGtct < 8:183394/149‑1 (MQ=255) aGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGtctc < 1:288455/149‑1 (MQ=255) gTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGtctc > 1:32592/1‑148 (MQ=255) gggTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGt < 3:312316/149‑1 (MQ=255) tgtACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGa < 6:126164/149‑1 (MQ=255) tgtACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGa < 7:206479/149‑1 (MQ=255) tACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGAc < 2:32592/148‑1 (MQ=255) acacTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGca > 5:185509/1‑97 (MQ=255) acacTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGca < 6:185509/97‑1 (MQ=255) tattatTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACg > 2:154843/1‑147 (MQ=255) tattTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGc > 4:240706/1‑124 (MQ=255) tattTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGc < 3:240706/124‑1 (MQ=255) attTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGc > 8:154706/1‑149 (MQ=255) gCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTgg < 1:120653/148‑1 (MQ=255) aCCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAg < 3:18536/103‑1 (MQ=255) aCCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAg > 4:18536/1‑103 (MQ=255) ccGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGt < 7:154706/149‑1 (MQ=255) gaga‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGc < 8:178672/149‑1 (MQ=255) gaga‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGc < 1:154083/149‑1 (MQ=255) cgcaCCATGGCAGTGCC‑TGGTGCGCCCCTGTCAACGCCACCCAGGAGAAACCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAagag > 3:23245/2‑149 (MQ=255) gcaCCATGGCAGTGCC‑TGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGa < 6:149056/78‑1 (MQ=38) gcaCCATGGCAGTGCC‑TGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCACGATGCCGGTGAGCAATGCACAACTGa > 5:149056/1‑78 (MQ=37) caCCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAAGAGcc > 5:270984/1‑149 (MQ=255) a‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAAGAGCCacta < 1:154843/149‑1 (MQ=255) gCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAAGAGCCactact > 1:32517/1‑149 (MQ=255) | TCCGGTTGATTGTTACCGTAAATACTGGTCAATGTGTGGATAGGTAACGTTTGAACAGATCACTTGCGCTCGCTGGCAGGATGCGTTTTCATCTGCACAAGTAGGGTGTACACACTATTATTTTGCACCGAGA‑‑‑TGCA‑GCACCA‑GGCACTGCCATGGTGCGCCCCTGTCAACGCCACCCAGGAGAACCCCGATGCCGGTGAGCAATGCACAACTGACCCAGATGTTCGAGCACGTACTGAAGCTGTCTCGAGTGGACGAAACGCAGAGCGTGGCCGTGCTCAAGAGCCACTACT > NC_002947/4447696‑4447988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |