Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,528,034 | C→T | 9.7% | A360A (GCC→GCT) | purB → | adenylosuccinate lyase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,528,034 | 0 | C | T | 9.7% | 110.3 / 3.5 | 41 | A360A (GCC→GCT) | purB | adenylosuccinate lyase |
Reads supporting (aligned to +/- strand): ref base C (16/21); new base T (2/2); total (18/23) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 |
CGAAGGCAACCTGGGTATCGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACGAGAAGCTCAAAGAGCTGA > NC_002947/4527887‑4528182 | cGAAGGCAACCTGGGTATCGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCa < 4:283427/149‑1 (MQ=255) ccTGGGTATCGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAg < 4:166732/149‑1 (MQ=255) cGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTTCAGGCTGGCCTCGAAGGcgatg > 8:60713/1‑142 (MQ=255) cGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTTCAGGCTGGCCTCGAAGGcgatg < 7:60713/146‑5 (MQ=255) gCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGc > 3:273790/1‑147 (MQ=255) cgcTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGaa < 3:110008/149‑1 (MQ=255) cTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCAAACCGTAATCGCCTTCGACGCCAGCCTCAAACGAATCCGCAAACTGGaat > 8:241333/1‑147 (MQ=255) ttCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTTCAGGCTGGCCTCGAAGGcgatga < 4:295685/134‑6 (MQ=255) ttCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTTCAGGCTGGCCTCGAAGGcgatga > 3:295685/1‑129 (MQ=255) ttCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCaa < 3:18885/149‑1 (MQ=255) cAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCAt < 2:207938/128‑1 (MQ=255) cAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCAt > 1:207938/1‑128 (MQ=255) ccTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTc < 2:122116/149‑1 (MQ=255) gCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGAcc > 2:219780/1‑149 (MQ=255) gcgcTTGCATCGTGACCTGACCGACTACACCGTGCTGCGCAAAATTGGCGTGGGCTTTGCCCAAAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGa < 1:315522/111‑1 (MQ=255) gcgcTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTTGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTgg < 4:226116/143‑1 (MQ=255) cgcTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCct‑g > 5:226084/1‑149 (MQ=255) gcTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCct‑gc < 4:273790/149‑1 (MQ=255) tGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGACTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCct‑gctg > 2:234477/1‑149 (MQ=255) cGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCct‑gctg < 7:303135/143‑1 (MQ=255) cGTGACATGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACCGCGTAATCGCCTTCGAGGCCAGCCTGAAACGGCTCGGCAAGCTGGAAGTCAACGAAGCTCGCCTCTACGCCGCCCTGGCCGCct‑ggag > 8:303135/1‑140 (MQ=255) gTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGt < 6:226084/148‑1 (MQ=255) tgacctgaccGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAACGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGc > 4:239368/1‑149 (MQ=255) cctgaccGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTgg < 6:269506/149‑1 (MQ=255) cGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGgccgagc < 3:239368/149‑1 (MQ=255) cGACTCCACCGTGCTGCGCAACCTGGGCGTGGACTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGgccgagc < 1:234477/149‑1 (MQ=255) tgctgcGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGAcc > 7:41203/1‑149 (MQ=255) gcAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCTCGCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGAt < 1:219780/149‑1 (MQ=255) ggCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGcgccgc < 8:41203/147‑1 (MQ=255) ggCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACa < 6:214836/148‑1 (MQ=255) cacaGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAAccc > 5:71433/1‑149 (MQ=255) acaGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGaaaa < 1:52005/145‑1 (MQ=255) acaGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGaaaa > 2:52005/1‑145 (MQ=255) acaGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAAcccc > 5:39882/1‑149 (MQ=255) aTCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACgag > 8:267931/1‑147 (MQ=255) gCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCTGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACGAGAAGCt > 3:29375/1‑149 (MQ=255) cTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATc < 6:60996/127‑1 (MQ=255) cTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATc > 5:60996/1‑127 (MQ=255) ttCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACgaga > 7:5534/1‑142 (MQ=255) ttCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACgaga < 8:5534/142‑1 (MQ=255) gAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAATTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACGAGAAGCTCAAag < 7:267931/148‑1 (MQ=255) cAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACGAGAAGCTCAAAGAGCTGa > 8:147240/1‑149 (MQ=255) | CGAAGGCAACCTGGGTATCGCCAACGCGCTGTTCCAGCACCTGGCCAGCAAGCTGCCGATCTCGCGCTGGCAGCGTGACCTGACCGACTCCACCGTGCTGCGCAACCTGGGCGTGGGCTTTGCCCACAGCGTCATCGCCTTCGAGGCCAGCCTGAAAGGCATCGGCAAGCTGGAAGTCAACGAAGCTCGCATCGCCGCCGACCTGGACGCCT‑GCTGGGAAGTGCTGGCCGAGCCGATCCAGACCGTGATGCGCCGCTTCAACATCGAAAACCCCTACGAGAAGCTCAAAGAGCTGA > NC_002947/4527887‑4528182 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |