| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,078,877 | G→C | 12.2% | intergenic (‑122/+275) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,078,877 | 0 | G | C | 12.2% | 197.7 / 17.1 | 74 | intergenic (‑122/+275) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base G (35/30); new base C (4/5); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.62e-02 | |||||||||||
TTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAT > NC_002947/5078732‑5079022 | ttttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGAACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTAAGAAAAGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCcggcgg > 1:264644/1‑149 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCggg < 5:295918/148‑1 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCAGGCgggg > 2:246245/1‑149 (MQ=255) tttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCgggg < 1:137263/148‑1 (MQ=255) ttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCt > 3:82260/1‑149 (MQ=255) tAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCt < 6:97811/148‑1 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt < 7:144780/149‑4 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCACGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt < 1:202628/149‑4 (MQ=255) cTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgtg < 1:153903/149‑5 (MQ=255) tACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGgcg > 4:173529/1‑149 (MQ=255) tACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTG‑TAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGc < 2:81917/139‑1 (MQ=255) tACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTG‑TAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGc > 1:81917/1‑139 (MQ=255) gTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCa > 6:25879/1‑148 (MQ=255) tccactccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAg > 8:265917/1‑148 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTg > 6:282120/1‑149 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTg > 2:148503/1‑149 (MQ=255) ctccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt > 5:218541/1‑148 (MQ=255) tccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCa > 8:263107/1‑149 (MQ=255) tccCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCa < 5:25879/149‑1 (MQ=255) cccAGCAGCGGAGCACGCCGAGGGAATCAGATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt > 1:187620/1‑116 (MQ=255) cccAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt < 2:187620/118‑4 (MQ=255) ccAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt > 7:226736/1‑145 (MQ=255) cagcagCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt > 3:138856/1‑144 (MQ=255) cagcagCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGAt < 7:265917/149‑1 (MQ=255) agcagcGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt > 7:80217/1‑143 (MQ=255) cagcGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGGCCATTGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACAATGCTAAAGCTGTCAGATCGc > 1:11487/1‑149 (MQ=255) ccGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTgg < 4:138856/149‑1 (MQ=255) gAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AAttttt > 6:156236/1‑145 (MQ=255) gAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AAttttt < 5:156236/145‑1 (MQ=255) ca‑atcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTc < 7:286321/120‑1 (MQ=255) ca‑atcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTc > 8:286321/1‑120 (MQ=255) a‑atcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATc < 5:255695/149‑1 (MQ=255) ggTCAGATCTTTCTGTATGAATCGTGATAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGttt < 5:282120/149‑1 (MQ=255) gATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTgcgc > 7:3042/1‑148 (MQ=255) aTCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AAttttt > 3:207608/1‑126 (MQ=255) aTCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AAttttt < 4:207608/126‑1 (MQ=255) tCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGAt < 1:290286/145‑1 (MQ=255) tATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg > 6:164490/1‑149 (MQ=255) tATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg < 1:123893/149‑1 (MQ=255) aTGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTACACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTcgg > 8:172345/1‑149 (MQ=255) gAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGa > 4:20056/1‑148 (MQ=255) gAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGa < 3:173529/148‑1 (MQ=255) gAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGa > 2:35741/1‑148 (MQ=255) aaTCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGAc > 8:60745/1‑148 (MQ=255) ttAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTg < 6:218541/149‑1 (MQ=255) cGAGTAACTACTGTGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGTGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTATTATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAg < 1:246245/149‑1 (MQ=255) gTAACTACTTGGTAAGTCCATGTTTGTTTTCCACAAGCCCCGGCGGGTCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCTCTTA‑AATTTTTGGCCAGAACAATTGTTTGCGCGATAAAGCTGGGACAACGCGGGAAGCTAt < 2:11487/149‑1 (MQ=255) gTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTAt < 8:3042/149‑1 (MQ=255) actactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCa < 8:226736/148‑1 (MQ=255) ctactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGt < 7:60745/149‑1 (MQ=255) ctGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGc > 6:151606/1‑148 (MQ=255) ctGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGc < 3:100605/148‑1 (MQ=255) tgcgTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcga > 3:130415/4‑149 (MQ=255) tGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcga > 2:56677/1‑149 (MQ=255) gggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcgac > 7:261756/1‑149 (MQ=255) gggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcgac > 4:165656/1‑149 (MQ=255) ggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcga < 7:263107/147‑1 (MQ=255) gTAAGTCCATGGTGGTTTTCCCCAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcgacga < 4:179572/149‑1 (MQ=255) tCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAttgtt < 3:165656/149‑1 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGTACAATCGTTTGCGCGATATAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATtgttgt < 7:172345/149‑1 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATtgttgt < 4:130415/149‑1 (MQ=255) aTGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTtgtg > 3:271715/1‑149 (MQ=255) ggtggtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGa > 2:91166/1‑149 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg > 3:111669/1‑148 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg < 4:111669/148‑1 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg < 1:35741/148‑1 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg < 5:151606/148‑1 (MQ=255) ccgtcaGCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAg > 5:271915/6‑148 (MQ=255) ccACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAg > 7:40966/1‑148 (MQ=255) gCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACAttt > 7:290555/1‑149 (MQ=255) ccccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTc > 6:225113/1‑45 (MQ=255) ccccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTc < 5:225113/45‑1 (MQ=255) ccccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACAttt > 8:53109/1‑148 (MQ=255) ccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAt > 8:202836/1‑149 (MQ=255) ccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAt > 1:55502/1‑149 (MQ=255) | TTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCA‑ATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTA‑AATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAT > NC_002947/5078732‑5079022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |