| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,182,836 | G→T | 6.0% | R109L (CGC→CTC) | PP_4562 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,182,836 | 0 | G | T | 6.0% | 215.1 / 3.2 | 66 | R109L (CGC→CTC) | PP_4562 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (33/29); new base T (2/2); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01 | |||||||||||
ACACGCCGGAAAGCGATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGAAGTTGC > NC_002947/5182689‑5182976 | acacGCCGGAAAGCGATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTgcgc > 4:268223/1‑149 (MQ=255) gCCGGAAAGCGATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGaca > 7:287396/1‑149 (MQ=255) aaGCGATGAGCTGCAGCACCTGAAAGTGCCAACAAATTTCCTCAAGACTCAACATGAGCAAATAGAAGAACGAAAGCCTGACAAGCGCCGCTAAACAATCAGACTGGAACTCAGCCCAGACCCGGAAACGCTGCTACGCGAAACCCGTc > 7:47759/1‑149 (MQ=255) cGATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCgg < 8:102472/149‑1 (MQ=255) gATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAATGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCggg < 2:244242/149‑1 (MQ=255) gAGCTGCAGCTCCTGAAGGTGCCGACCAAATTGGTCAACGCTCACGTAGAGCAAATGGAAGTGCGCAAGCCTGGCAAGAGCTGCTCCACCATTAGGCTGCCCCTCTGTGTCGACCGTGTCTGTCTGCTGTGCGACACTCGTCCGGGTg < 8:47759/148‑1 (MQ=255) gCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCgg < 3:39485/143‑1 (MQ=255) gCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCgg > 4:39485/1‑143 (MQ=255) cTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCTCGCCACCCGGACGGGTGTCgc > 5:275925/1‑148 (MQ=255) cTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGa < 5:187607/149‑1 (MQ=255) cagcaCCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCTCGCCACCCGGACGGGTGTCgcg < 6:275925/147‑3 (MQ=255) cagcaCCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGag < 2:92961/147‑1 (MQ=255) agcaCCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGagcag > 2:114336/1‑149 (MQ=255) agcaCCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGagcag < 3:67839/149‑1 (MQ=255) aCCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTg < 8:241286/149‑1 (MQ=255) cTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGCCCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGa > 5:11358/1‑149 (MQ=255) ggTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTcc < 8:287396/149‑1 (MQ=255) ccaccaATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGGGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAAc > 3:79909/1‑149 (MQ=255) accaATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGa < 7:221502/110‑1 (MQ=255) accaATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTg > 2:53216/1‑124 (MQ=255) accaATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTg < 1:53216/124‑1 (MQ=255) accaATTTCCTCAAGGCTCACATTGAGCAAATGGAAGTGCGCAAGCATGGCAAGCGCCGCTCCACCATCAGCCAGGCCCTCACCGCCGACAGGGACTCGCTGCTGCGCGa > 8:221502/1‑110 (MQ=255) caATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGCCACCCGGACGGGTgtc < 1:50082/124‑3 (MQ=255) caATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGCCACCCGGACGGGTgtc > 2:50082/1‑122 (MQ=255) aTTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTa < 1:114336/149‑1 (MQ=255) ttCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTa > 4:35915/1‑147 (MQ=255) tCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTgcgc > 6:278207/1‑98 (MQ=255) tCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTgcgc < 5:278207/98‑1 (MQ=255) tCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCg > 2:68061/1‑149 (MQ=255) ggCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAg > 4:314972/1‑149 (MQ=255) tCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGcc > 4:155271/1‑149 (MQ=255) gccTTGAGGAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTaa > 7:295068/2‑143 (MQ=255) gccTTGAGGAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTaa < 8:295068/142‑1 (MQ=255) tGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCg < 3:268223/149‑1 (MQ=255) gAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGAt > 3:167582/1‑149 (MQ=255) cgcAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCGGGCTTTCTCGATGCGATc > 5:31950/1‑149 (MQ=255) cAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGc > 8:262360/1‑117 (MQ=255) cAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGc < 7:262360/117‑1 (MQ=255) gCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCAt > 5:74806/1‑149 (MQ=255) gCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCAt > 8:291053/1‑149 (MQ=255) cTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATg > 8:265647/1‑148 (MQ=255) tGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGa > 8:81546/1‑149 (MQ=255) ggCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGAt > 6:217905/1‑149 (MQ=255) gCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGt < 3:223178/111‑1 (MQ=255) gCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGt > 4:223178/1‑111 (MQ=255) gCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGa < 8:84492/147‑1 (MQ=255) gccgcTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCTCGCCACCCGGACGGGTGTCGcgcag > 3:23037/1‑77 (MQ=25) gccgcTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCTCGCCACCCGGACGGGTGTCGcgcag < 4:23037/77‑1 (MQ=25) ccgcTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCa < 5:217905/149‑1 (MQ=255) cTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGc > 8:260154/1‑149 (MQ=255) ccaccaTCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGTGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGccc > 4:263609/1‑149 (MQ=255) caccaTCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCt > 7:28279/1‑149 (MQ=255) ccaTCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGc < 7:291053/149‑1 (MQ=255) aTCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCtt < 6:28442/149‑1 (MQ=255) gCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAgg > 7:243651/1‑94 (MQ=255) gCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAgg < 8:243651/94‑1 (MQ=255) ccTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGaac > 3:146472/1‑148 (MQ=255) cTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCGGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGaacaa < 6:31950/149‑1 (MQ=255) gCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAAccc < 7:265647/149‑1 (MQ=255) ccTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGc < 7:260154/149‑1 (MQ=255) aGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAAt < 1:68061/149‑1 (MQ=255) aGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAAt < 3:155271/149‑1 (MQ=255) gcgcCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACCACCCGCCAATg > 6:181522/1‑149 (MQ=255) aCCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCcttc > 8:104511/1‑149 (MQ=255) tCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGAAGtt > 4:297965/1‑149 (MQ=255) gctgctGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGAAGtt < 3:314972/147‑1 (MQ=255) gctgctGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGAAGTTGc > 6:42980/1‑149 (MQ=255) ctgcGCGACACCCGTCCGTGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATTGATGACGATCAGGCCCTGCTTGaa < 8:37226/116‑1 (MQ=255) ctgcGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGaa > 7:37226/1‑116 (MQ=255) gcgcGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGc < 7:68603/109‑1 (MQ=255) gcgcGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGc > 8:68603/1‑109 (MQ=255) gcgACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGaa < 4:97365/136‑1 (MQ=255) gcgACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGaa > 3:97365/1‑136 (MQ=255) | ACACGCCGGAAAGCGATGAGCTGCAGCACCTGAAGGTGCCCACCAATTTCCTCAAGGCTCACCTTGAGCAAATGGAAGTGCGCAAGCCTGGCAAGCGCCGCTCCACCATCAGCCTGGCCCTCAGCGCCGACCGGGACTCGCTGCTGCGCGACACCCGTCCGGGTGGCGAGCAGCTGGACTTCCGCAACTTCGTACAGGCGTAAGGCCGTCAGGCTTTCTCGATGCGATCGTCATGGATGACGATCAGGCCCTGCTTGAACAACCCGCCAATGGCCTTCTTGAAGTTGC > NC_002947/5182689‑5182976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |