Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,245,902 C→T 7.0% R920Q (CGG→CAG)  PP_4623 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,245,9020CT 7.0% 166.3 / 2.6 57R920Q (CGG→CAG) PP_4623hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (31/22);  new base T (2/2);  total (33/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.39e-01

GTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCGTGCTCACGCC  >  NC_002947/5245756‑5246049
                                                                                                                                                  |                                                                                                                                                    
gTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCg                                                                                                                                                     >  5:118071/1‑148 (MQ=255)
    gaccccccACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGc                                                                                                                                                >  2:31129/4‑149 (MQ=255)
                 accaccacGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTc                                                                                                                                       <  4:254573/145‑1 (MQ=255)
                 accaccacGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTc                                                                                                                                       >  3:254573/1‑145 (MQ=255)
                    accacGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGAc                                                                                                                                <  6:118071/149‑1 (MQ=255)
                         ggACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATACCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACCCCCCTGCCTCGGGCGACGGCAt                                                                                                                          >  5:32117/1‑149 (MQ=255)
                             gAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCTGCACGCCCCTGCCTCGGGCGACGGCATCCAg                                                                                                                      >  8:101282/1‑149 (MQ=255)
                             gAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAg                                                                                                                      >  6:119821/1‑149 (MQ=255)
                                    gCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCaccacc                                                                                                               >  5:134991/1‑149 (MQ=255)
                                             cGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCCCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCa                                                                                                      <  8:14901/149‑1 (MQ=255)
                                                cGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCg                                                                                                   >  2:132018/1‑149 (MQ=255)
                                                   cgcTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCg                                                                                                <  8:186078/149‑1 (MQ=255)
                                                          ttCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGcac                                                                                                                   <  2:323505/123‑1 (MQ=255)
                                                          ttCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGcac                                                                                                                   >  1:323505/1‑123 (MQ=255)
                                                            cAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCa                                                                                         <  4:260369/147‑1 (MQ=255)
                                                               cGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCGTCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGc                                                                                    >  6:280513/1‑149 (MQ=255)
                                                                      gTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCg                                                                              <  5:119821/148‑1 (MQ=255)
                                                                         gATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATc                                                                           >  3:160810/1‑148 (MQ=255)
                                                                         gATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATc                                                                           >  4:298209/1‑148 (MQ=255)
                                                                          atcatcCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCaa                                                                         <  7:80838/149‑1 (MQ=255)
                                                                            catcCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCACGGGCGACCGCATCCAGCACCACCCCAATGCCAACGCCGGCGCCCAGTTGCTCTAAGATAAATg                                                                       >  6:219908/1‑149 (MQ=255)
                                                                             atcCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGc                                                                      >  8:64120/1‑149 (MQ=255)
                                                                                  ccTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTc                                                                  >  5:209546/1‑148 (MQ=255)
                                                                                      aTACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAg                                                               <  1:132018/147‑1 (MQ=255)
                                                                                          gTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGAc                                                         >  1:316177/1‑149 (MQ=255)
                                                                                           tttCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAAt                                                                        <  6:241523/133‑1 (MQ=255)
                                                                                           tttCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAAt                                                                        >  5:241523/1‑133 (MQ=255)
                                                                                              ctcCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGc                                                     >  4:194816/1‑149 (MQ=255)
                                                                                                     tCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATaa                                              <  3:298209/149‑1 (MQ=255)
                                                                                                     tCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATaa                                              >  5:95503/1‑149 (MQ=255)
                                                                                                          gACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCa                                         >  7:211859/1‑149 (MQ=255)
                                                                                                           aCAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCaa                                                                >  4:212962/1‑125 (MQ=255)
                                                                                                           aCAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCaa                                                                <  3:212962/125‑1 (MQ=255)
                                                                                                            cAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGt                                                                    <  3:150027/120‑1 (MQ=255)
                                                                                                              ggATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCAcgcg                                     <  8:211859/149‑1 (MQ=255)
                                                                                                                 tCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCCTCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTc                                  >  5:218399/1‑149 (MQ=255)
                                                                                                                 tCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTc                                  >  7:298861/1‑149 (MQ=255)
                                                                                                                  ccccGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCt                                 >  5:40494/1‑149 (MQ=255)
                                                                                                                    ccGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGAACGCGGTCTTg                               >  3:151073/1‑149 (MQ=255)
                                                                                                                    ccGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACACCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTg                               <  5:219908/149‑1 (MQ=255)
                                                                                                                     cGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTgg                              <  3:194816/149‑1 (MQ=255)
                                                                                                                      gATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGc                             <  7:64120/149‑1 (MQ=255)
                                                                                                                          cGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATa                         <  6:209546/149‑1 (MQ=255)
                                                                                                                           gCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGACTTCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCGCGATAACGGCACGCGGTCTTGGCAAt                          >  1:76373/1‑148 (MQ=255)
                                                                                                                               ggTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTg                    <  1:31129/149‑1 (MQ=255)
                                                                                                                                gTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGc                   <  4:7060/149‑1 (MQ=255)
                                                                                                                                gTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGc                   >  3:7060/1‑149 (MQ=255)
                                                                                                                                    ccccTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAg               >  7:205057/1‑149 (MQ=255)
                                                                                                                                    ccccTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCCGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAg               >  3:156352/1‑149 (MQ=255)
                                                                                                                                     cccTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGt              >  2:309150/1‑149 (MQ=255)
                                                                                                                                       cTATCGGCGGCTGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTc             >  4:257668/1‑148 (MQ=255)
                                                                                                                                       cTATCGGCGGCTGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTc             <  3:257668/148‑1 (MQ=255)
                                                                                                                                       cTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCg            >  4:107015/1‑149 (MQ=255)
                                                                                                                                        tATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATaa                                              >  1:153645/1‑114 (MQ=255)
                                                                                                                                        tATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATaa                                              <  2:153645/114‑1 (MQ=255)
                                                                                                                                          tCGGCGGCTGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCGTg          <  7:101282/148‑1 (MQ=255)
                                                                                                                                           cggcggCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCGTGc         <  6:40494/148‑1 (MQ=255)
                                                                                                                                                 ccGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCGTGCTCACGcc  <  6:95503/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GTACGATCCCCCACTCCACCACCACGGACGAAATACGCTCGGCAGCGTCGGCGCTGTCTTCAGCGGCTTCGTTGATCATCCGCCTGATACGTTTCTCCAGGTCCTGGACAGGATCCCCGATACGCCCGGTCTCCCCTATCGGCGGCCGCACGCCCCTGCCTCGGGCGACGGCATCCAGCACCACCCCAATGCCATCGCCGGCGCGCAGTTGCTCTTCGATCAATGCGTTCAAGCGCGACTGGCTCGATAACGGCACGCGGTCTTGGCAATAACCTGCCAAGTCGTGCTCACGCC  >  NC_002947/5245756‑5246049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: