| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 417,622 | C→G | 5.2% | P71A (CCG→GCG) | waaP → | lipopolysaccharide core heptose (I) kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 417,622 | 0 | C | G | 5.2% | 256.1 / 3.0 | 77 | P71A (CCG→GCG) | waaP | lipopolysaccharide core heptose (I) kinase |
| Reads supporting (aligned to +/- strand): ref base C (37/36); new base G (2/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
GCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGA > NC_002947/417481‑417769 | gcgcTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCt > 1:144689/1‑149 (MQ=255) cgcTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGGCAACTTGGCGGTgaac < 8:127516/149‑4 (MQ=255) gcTGCAAGGCGAGGTCTATCGCGATCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCg < 7:77978/149‑1 (MQ=255) aGGCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTg > 2:219826/1‑149 (MQ=255) ggCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTgg < 7:110105/149‑1 (MQ=255) ggCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTgg < 2:79580/149‑1 (MQ=255) gCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGc < 4:169322/149‑1 (MQ=255) gTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGa < 5:148569/149‑1 (MQ=255) tCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggc < 6:58187/149‑1 (MQ=255) gcgAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggcgg > 8:303072/1‑149 (MQ=255) tGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggcgg > 1:134640/1‑143 (MQ=255) tGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggcgg < 2:134640/143‑1 (MQ=255) ggAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATc > 5:311739/1‑148 (MQ=255) aGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAAc < 3:148975/149‑1 (MQ=255) cgcACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCa > 1:217832/1‑149 (MQ=255) aCGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCggg > 7:164252/1‑111 (MQ=255) aCGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATATTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCggg < 8:164252/111‑1 (MQ=255) gcACCGAAGTGGCTGGCGAGGGCGTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGc < 1:248336/149‑1 (MQ=255) gAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGcc > 6:204350/1‑149 (MQ=255) aGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCa > 8:268935/1‑105 (MQ=255) aGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCa < 7:268935/105‑1 (MQ=255) tggctggcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGAcc < 5:283693/149‑1 (MQ=255) tggcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGa > 7:39530/1‑149 (MQ=255) gcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggcgg > 1:180985/1‑107 (MQ=255) gcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATggcgg < 2:180985/107‑1 (MQ=255) gcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGAcc < 3:116486/149‑1 (MQ=255) gcGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGAc < 8:39530/148‑1 (MQ=255) gAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCa > 3:148540/1‑142 (MQ=255) gAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCa < 4:148540/142‑1 (MQ=255) ggCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGAc > 1:36979/1‑137 (MQ=255) ggCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGAc < 2:36979/137‑1 (MQ=255) ggCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGAc > 1:32200/1‑137 (MQ=255) ggCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGAc < 2:32200/137‑1 (MQ=255) tttttCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGc > 5:75371/1‑149 (MQ=255) gTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACgg < 2:144689/149‑1 (MQ=255) tCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGc < 6:311739/149‑1 (MQ=255) cAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGc > 8:289744/1‑148 (MQ=255) aaGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCg < 2:217832/148‑1 (MQ=255) aTCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCg > 7:71305/1‑149 (MQ=255) cACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTgg < 7:289744/149‑1 (MQ=255) ccGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGGTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGgca < 4:253958/149‑1 (MQ=255) gCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTTGCAGCAAc > 8:133287/1‑149 (MQ=255) gCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAc > 8:128985/1‑149 (MQ=255) aTCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAccc > 5:313496/1‑149 (MQ=255) tCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCg > 1:211852/1‑149 (MQ=255) gCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGcc > 1:55072/1‑149 (MQ=255) gggCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCcgcg > 8:109660/1‑148 (MQ=255) gggCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCcgcg > 3:82489/1‑148 (MQ=255) ggCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCgca < 1:31014/149‑1 (MQ=255) gCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGgcag > 8:175616/1‑133 (MQ=255) gCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGgcag < 7:175616/133‑1 (MQ=255) gCGAGAGCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCgcag < 6:75371/149‑1 (MQ=255) gagaTCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCgcagca < 8:71305/149‑1 (MQ=255) ttCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGt > 8:18699/1‑86 (MQ=255) ttCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGt < 7:18699/86‑1 (MQ=255) cAAGAACCTGTTCACCGCTAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATc > 5:229137/1‑61 (MQ=255) cAAGAACCTGTTCACCGCTAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATc < 6:229137/61‑1 (MQ=255) aGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTtcatc < 4:82489/149‑1 (MQ=255) aaCCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTtcatca > 6:146011/1‑148 (MQ=255) tGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCAcc > 3:120349/1‑149 (MQ=255) cgagcACCGGCAACTTGGCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCAcc > 7:84624/5‑149 (MQ=255) gagcACCGGCAACTTGGCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCgcgc > 7:17722/4‑128 (MQ=255) gagcACCGGCAACTTGGCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCgcgc < 8:17722/125‑1 (MQ=255) ttCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGt < 7:63919/108‑1 (MQ=255) ttCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCAcc < 5:204350/147‑1 (MQ=255) ttCACCCCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGt > 8:63919/1‑108 (MQ=255) ccGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAagag > 6:288320/1‑149 (MQ=255) cGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAccc > 6:251293/1‑114 (MQ=255) cGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAccc < 3:65710/114‑1 (MQ=255) cGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAccc > 4:65710/1‑114 (MQ=255) cGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAAccc < 5:251293/114‑1 (MQ=255) gCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGc > 2:185817/1‑96 (MQ=255) aaGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGgc < 7:109660/149‑1 (MQ=255) gTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGgcgc < 4:120349/149‑1 (MQ=255) ttGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGcc > 7:45706/1‑149 (MQ=255) gCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGCGCGTGGCAGCAACCCGGCCGCCCAGCACTCGTGCATCATCACCGAAGAGCTGGCGCCGa > 4:204653/1‑149 (MQ=255) gCCGGAGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGa > 4:37902/1‑149 (MQ=255) ccGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGTCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGa < 7:128985/148‑1 (MQ=255) ccGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGa < 7:133287/148‑1 (MQ=255) | GCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCCGCACGCTGCGCACCGAAGTGGCTGGCGAGGGCTTTTTCGTCAAGATCCACCGTGGCATCGGCTGGGGCGAGATCTTCAAGAACCTGTTCACCGCCAAGTTGCCGGTGCTCGGGGCTGGCCAGGAATGGCGGGCGATCCAACGCCTGCATGAAGTGGGCGTGCCGACCATGACCGCAGTCGCCTACGGCGAGCGTGGCAGCAACCCGGCCGCGCAGCACTCGTTCATCATCACCGAAGAGCTGGCGCCGA > NC_002947/417481‑417769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |