| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,525,770 | C→A | 5.8% | intergenic (+60/‑63) | PP_4858 → / → PP_4859 | hypothetical protein/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,525,770 | 0 | C | A | 5.8% | 222.2 / 2.7 | 69 | intergenic (+60/‑63) | PP_4858/PP_4859 | hypothetical protein/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (32/33); new base A (2/2); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
AAGGCGGCTCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGT > NC_002947/5525622‑5525913 | aaGGCGGCTCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTcc < 5:137732/149‑1 (MQ=255) gcggcTCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCAtt > 1:23138/1‑149 (MQ=255) ggcTCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGa > 2:114524/1‑149 (MQ=255) gATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGc < 3:173715/149‑1 (MQ=255) gATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGc < 1:114524/149‑1 (MQ=255) aTCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCt < 7:107832/149‑1 (MQ=255) tCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCtt < 3:23607/149‑1 (MQ=255) tCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGt > 3:265925/1‑149 (MQ=255) tCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGt > 3:259809/1‑149 (MQ=255) aTCGAACTAGCTGGGCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttt < 3:274788/149‑1 (MQ=255) aTCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttt > 6:218098/1‑149 (MQ=255) gcGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCgg < 8:266382/136‑1 (MQ=255) gtagatgCTGTCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGTCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttttt < 5:236285/142‑1 (MQ=255) gAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttttt < 3:279230/148‑1 (MQ=255) aaCAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTAt > 2:107360/1‑149 (MQ=255) gCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATc > 6:216287/1‑145 (MQ=255) tGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATGTACCGGGCTTTGTTTTTTTATCAAGAGt > 4:164580/1‑149 (MQ=255) gtgtCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCa < 1:126159/149‑1 (MQ=255) cTGAAGGTGGCTCGGATCGCCTGGTTAAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGa > 1:7557/1‑149 (MQ=255) ggTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGtt < 5:216287/149‑1 (MQ=255) gTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTa > 2:137435/1‑149 (MQ=255) tCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTag < 4:269028/124‑1 (MQ=255) tCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTag > 3:269028/1‑124 (MQ=255) ggATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGc < 2:23138/149‑1 (MQ=255) tCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCg < 2:7557/149‑1 (MQ=255) gTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGcatcat < 5:218098/148‑1 (MQ=255) gTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGca > 3:53073/1‑144 (MQ=255) gTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGca < 4:53073/144‑1 (MQ=255) gAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGT‑CATTGCCCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCAtgctgc > 3:64757/1‑149 (MQ=255) aCTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGcc > 5:258092/1‑149 (MQ=255) aGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCcgcgc > 3:14183/1‑149 (MQ=255) ccGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCgcgcgc > 6:25646/1‑149 (MQ=255) tgAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa < 1:137435/148‑1 (MQ=255) tgAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa < 4:265925/148‑1 (MQ=255) tgAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa < 4:259809/148‑1 (MQ=255) aGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa > 3:255015/1‑146 (MQ=255) aGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACa < 6:258092/148‑1 (MQ=255) aGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAg < 3:107011/149‑1 (MQ=255) cTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa > 6:252640/1‑144 (MQ=255) cTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGaa < 5:252640/144‑1 (MQ=255) ggCCGAAAAGAACAACTTCTTTCAAAACGCTTGCTCCCCTCCAGTCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCTCGCCGAACAGAAGCt < 8:8183/141‑1 (MQ=255) ggCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCAAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCt > 7:8183/1‑141 (MQ=255) gAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCa < 2:34342/149‑1 (MQ=255) aacaacTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCt > 6:137201/1‑149 (MQ=255) ttCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTa < 8:303035/126‑1 (MQ=255) ttCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTa > 7:303035/1‑126 (MQ=255) cTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGAt < 4:14183/148‑1 (MQ=255) cTGTCACAACGCTTGCTCCCCTCCAGGCCCGGGCCATTCACCGGTATTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGAt < 1:107360/148‑1 (MQ=255) cacaACGCTTGCTCCCCTCCAGGCCCGGTCCATTAACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgcc > 1:149086/1‑147 (MQ=255) cacaACGCTTGCTCCCCTCCAGGCCCGGTCCATTAACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgcc < 2:149086/147‑1 (MQ=255) acaACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccgc < 5:25646/148‑1 (MQ=255) acaACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTT‑CAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCgcct > 3:245019/1‑149 (MQ=255) acaACGCTTGCTCCCCTCAAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGGTACAGACCCGc < 4:28076/128‑1 (MQ=255) acaACGCTTGCTAACCTCCAGGCCCGGTCCAATGACCGGGCTTTGTTTATTTATCTAGAGAGCCAAGCCTGACCGTTAAAGAAGCACGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGc > 3:28076/1‑128 (MQ=255) caACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCgcct > 1:199070/1‑149 (MQ=255) gCTTGCTCCCCTCGAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACa < 1:310895/75‑1 (MQ=255) gCTTGCTCCCCTCAAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACa > 2:310895/1‑75 (MQ=255) tCCCCTCCAGGCCCGGTCCATTGACCCGGCTTTGTTTTTTTATCTAGAGTGCCCAGCGTGTCCGTTACAGAACCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGAtcgcg > 5:200344/1‑132 (MQ=255) cccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCGGCCTGCTCATg > 8:245821/1‑148 (MQ=255) ccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGga < 5:137201/149‑1 (MQ=255) aaagCCCGGTCAATGGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGgag < 5:80758/143‑1 (MQ=255) aaagCCCGGTCAATGGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGgag > 6:80758/4‑146 (MQ=255) ggCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTgg < 2:199070/149‑1 (MQ=255) agCCCGGTCAATGGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACa < 4:172265/100‑1 (MQ=255) agCCCGGTCAATGGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACa > 3:172265/2‑101 (MQ=255) gCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGc > 3:40419/1‑149 (MQ=255) cccGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGcc > 6:32182/1‑149 (MQ=255) cGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGt > 5:258745/1‑149 (MQ=255) ggTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTgg < 6:212650/144‑1 (MQ=255) ggTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTgg > 5:212650/1‑144 (MQ=255) | AAGGCGGCTCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGT > NC_002947/5525622‑5525913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |