Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 464,322 G→C 7.7% H259D (CAC→GAC) ‡ davB ← lysine 2‑monooxygenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947464,3220GC 7.7% 195.8 / 6.7 65H259D (CAC→GAC) ‡davBlysine 2‑monooxygenase
Reads supporting (aligned to +/- strand):  ref base G (31/29);  new base C (2/3);  total (33/32)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.05e-01

GCGGCGCGGGCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGCGCGAGGTG  >  NC_002947/464174‑464470
                                                                                                                                                       |                                                                                                                                                    
GCGGCGCGGGCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTg                                                                                                                                                      <  2:269758‑M1/149‑1 (MQ=255)
   GCGCGGGCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCtg                                                                                                                                                   >  7:268710‑M1/1‑149 (MQ=255)
      CGGGCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCtggtg                                                                                                                                                >  4:230090‑M1/1‑149 (MQ=255)
       gggCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCtggtgg                                                                                                                                               >  7:160120/1‑149 (MQ=255)
          cAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGCACCTGGTGgtcg                                                                                                                                            <  2:295496/149‑1 (MQ=255)
               cgcTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTGCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCa                                                                                                                                       <  5:231539/149‑1 (MQ=255)
                     aCCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCTCTTGGt                                                                                                                                 >  7:298716/1‑149 (MQ=255)
                      ccgcGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGtc                                                                                                                                <  5:212838/146‑1 (MQ=255)
                       cccGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGtcgtcg                                                                                                                                         <  8:187125/139‑1 (MQ=255)
                       cccGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGtcgtcg                                                                                                                                         >  7:187125/1‑139 (MQ=255)
                       cccGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGtca                                                                                                                               >  5:118436/1‑149 (MQ=255)
                        ccGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGtcat                                                                                                                              <  3:52871/149‑1 (MQ=255)
                            tACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATcacc                                                                                                                          <  6:241007/149‑1 (MQ=255)
                              ttgcccgcgccgccATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATcaccac                                                                                                                        <  8:86570‑M2/135‑1 (MQ=255)
                               gcgGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCAcg                                                                                                                       >  4:119187/1‑149 (MQ=255)
                                     cgccgccATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGaa                                                                                                                  <  3:82582‑M2/141‑1 (MQ=255)
                                            atggcgCGTGCTCAGGGGTGGGCCCTCTGGCCAAATCACGGATCGGTTCGGTACGTCGGGCCATATTCCTTGTTGGACCAAAGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTc                                                                                                            <  1:100135/144‑1 (MQ=255)
                                                 gCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATc                                                                                                     <  6:118436/149‑1 (MQ=255)
                                                   gTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATc                                                                                                     >  6:238487/1‑147 (MQ=255)
                                                      cTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCa                                                                                                          >  4:207322/1‑139 (MQ=255)
                                                      cTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCa                                                                                                          <  3:207322/139‑1 (MQ=255)
                                                        cAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTgg                                                                                              >  3:22759/1‑149 (MQ=255)
                                                         aGGCTTGTGCCCGCTGGCCAATGCACGCAGCATTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCTACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGCGTTgg                                                                                              <  2:233197/148‑1 (MQ=255)
                                                         aGGCTTGTGCACTGTGTCCAATGAACTCATCTTTCCGGTAAGTCGCGTCAGATGCCTTGTGGCAC‑‑TTGTTGCAGGCTCCCGAGGACCTGTTGCTGGTGGTCTTCGCAGTTGGTCTTTACCACTTGTAAGATTTCCAGCATCTAGTTgg                                                                                              <  8:160120/148‑1 (MQ=255)
                                                                tggccTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCGTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTcc                                                                                      <  4:280962/146‑1 (MQ=255)
                                                                  cccTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGa                                                                                    <  1:269758/149‑1 (MQ=255)
                                                                       tGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTc                                                                                 <  4:17058/147‑1 (MQ=255)
                                                                          ccAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAAc                                                                            <  5:235386/149‑1 (MQ=255)
                                                                                  cGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTg                                                                    >  5:260768/1‑149 (MQ=255)
                                                                                   gCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGTGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTg                                                                    >  1:48880/1‑149 (MQ=255)
                                                                                   gCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAAccgcc                                                                        <  7:129999/144‑1 (MQ=255)
                                                                                   gCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAAccgcc                                                                        >  8:129999/1‑144 (MQ=255)
                                                                                   gCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGc                                                                   >  4:112858/1‑149 (MQ=255)
                                                                                             ggTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGAc                                                         >  4:9645/1‑149 (MQ=255)
                                                                                              gTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGt                                                                                  <  1:305700/123‑1 (MQ=255)
                                                                                              gTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGt                                                                                  >  2:305700/1‑123 (MQ=255)
                                                                                                      cgcCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGaa                                                <  7:45357/149‑1 (MQ=255)
                                                                                                      cgcCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGaa                                                <  3:112858/149‑1 (MQ=255)
                                                                                                             tGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTcg                                         <  3:119187/149‑1 (MQ=255)
                                                                                                                cTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTGGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCgg                                      >  1:225980/1‑149 (MQ=255)
                                                                                                                       gCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGcc                                                                  <  6:195942/115‑1 (MQ=255)
                                                                                                                       gCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGcc                                                                  >  5:195942/1‑115 (MQ=255)
                                                                                                                       gCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTg                                 <  6:260768/148‑1 (MQ=255)
                                                                                                                         aC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGa                                                                                    <  3:35946/95‑1 (MQ=255)
                                                                                                                         aC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGa                                                                                    >  4:35946/1‑95 (MQ=255)
                                                                                                                         aC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTgg                                >  3:94217/1‑147 (MQ=255)
                                                                                                                          c‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAg                             >  4:125691/1‑149 (MQ=255)
                                                                                                                                ttCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCt                           >  2:173467/1‑147 (MQ=255)
                                                                                                                                ttCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGAAGTTGGTCATCACCACGCGGAAGATTTCCATCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCa                         <  8:298716/149‑1 (MQ=255)
                                                                                                                                  ccACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGc                       >  2:32470/1‑149 (MQ=255)
                                                                                                                                   cACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGaagctaagct                      >  7:109879/1‑149 (MQ=255)
                                                                                                                                   cACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCt                      >  2:14835/1‑149 (MQ=255)
                                                                                                                                   cACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCt                      <  2:48880/149‑1 (MQ=255)
                                                                                                                                   cACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCt                      >  3:135699/1‑149 (MQ=255)
                                                                                                                                      gCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTgg                   >  8:216038/1‑149 (MQ=255)
                                                                                                                                      gCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTgg                   <  1:173467/149‑1 (MQ=255)
                                                                                                                                        cgacGACCACCAGCACCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTgg                   >  6:180145/4‑147 (MQ=255)
                                                                                                                                        cgacGACCACCAGCACCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTgg                   <  5:180145/144‑1 (MQ=255)
                                                                                                                                          ccGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCaa                >  8:81842/1‑148 (MQ=255)
                                                                                                                                            gACCACCAGCACCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGt                                                                     <  6:203049/93‑1 (MQ=255)
                                                                                                                                            gACCACCAGCACCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGt                                                                     >  5:203049/1‑93 (MQ=255)
                                                                                                                                                  caGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAgcgc        >  7:75487/1‑148 (MQ=255)
                                                                                                                                                     gTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGcgcg       <  1:285486/146‑1 (MQ=255)
                                                                                                                                                     gTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGcgcg       <  1:280995/146‑1 (MQ=255)
                                                                                                                                                     gTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGcgcg       >  2:280995/1‑146 (MQ=255)
                                                                                                                                                     gTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGcgcg       >  2:285486/1‑146 (MQ=255)
                                                                                                                                                       gCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGCGCGAGGTg  >  4:67826/1‑149 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
GCGGCGCGGGCAATGCGCTTGACCCCGGTACGCGGTGCGCCGCCATGCAGCGTGCTCAGGCTGGTGCCCTCTGGCCAATGCACGCAGCGTTCCGGTACGTCGCGCCAGATGCCTTGTGGCAC‑‑TTGTTCCACGCCCCCGACCACCAGGTGCTGGTGGTCGTCGCAGTTGGTCATCACCACGCGGAAGATTTCCAGCATCGAGTTGGGGAAGTCCGAGTCCCAACCGCCGGTGCCGAAACCGACCTGGCCGAACACTTCGCGGTGCTGGAAGCTCAGCTTGGCAAAAGAGCGCGAGGTG  >  NC_002947/464174‑464470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: