| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,871,629 | G→C | 6.7% | L342V (CTC→GTC) ‡ | ptsP ← | phosphoenolpyruvate‑dependent regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,871,629 | 0 | G | C | 6.7% | 237.0 / 5.6 | 74 | L342V (CTC→GTC) ‡ | ptsP | phosphoenolpyruvate‑dependent regulator |
| Reads supporting (aligned to +/- strand): ref base G (34/35); new base C (3/2); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
TCAATACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTCC > NC_002947/5871481‑5871774 | tCAATACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAg > 7:159191/1‑149 (MQ=255) aaTACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGc < 7:160959/148‑1 (MQ=255) tACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATg > 4:136680/1‑149 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtgt > 8:156926/1‑147 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGgtgt > 6:104417/1‑147 (MQ=255) cTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCa < 4:313510/149‑1 (MQ=255) ggAGTATGGCTGGTGGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGGCCATGCTCGgtgaagtg < 1:110617/148‑6 (MQ=255) gAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTc < 4:307469/149‑1 (MQ=255) gTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCt < 7:166699/149‑1 (MQ=255) tGGCAGGTGGACCTGGCCCATCACGGGGGGGATGCCCATGGCCCGCGGGAGCTTGGCTACTTGGTAGTTGCCGTAGCGTAGTACCTAGACCAGGCCGACCATCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCa < 1:71598/148‑1 (MQ=255) ggCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACt > 2:323660/1‑149 (MQ=255) gTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGc > 5:112671/1‑126 (MQ=255) gTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGc < 6:112671/126‑1 (MQ=255) cGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAg > 5:163832/1‑148 (MQ=255) ccAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATg < 8:159191/149‑1 (MQ=255) cAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATgg > 4:134154/1‑149 (MQ=255) ggCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGgtg < 7:156926/149‑1 (MQ=255) gCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGgtgt > 1:216566/1‑149 (MQ=255) cccATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGtgt‑t < 6:184048/149‑1 (MQ=255) cccATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGtgt‑t < 3:136680/149‑1 (MQ=255) ccATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGtgt‑tg > 4:307889/1‑149 (MQ=255) cATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCAt > 5:321157/1‑111 (MQ=255) cATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCAt < 2:296513/111‑1 (MQ=255) cATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCAt > 1:296513/1‑111 (MQ=255) cATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCAt < 6:321157/111‑1 (MQ=255) cGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCAt < 6:195404/149‑1 (MQ=255) gggATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATacac < 3:307889/149‑1 (MQ=255) ggATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATaccc > 6:318492/1‑146 (MQ=255) ccATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGAc > 4:67066/1‑149 (MQ=255) ccATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGAc > 1:80558/1‑149 (MQ=255) gCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGc < 7:18457/131‑1 (MQ=255) gCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGc > 8:18457/1‑131 (MQ=255) cccGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAg > 6:230969/1‑149 (MQ=255) ccGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGCCCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgc > 5:209504/1‑149 (MQ=255) ccGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgc > 3:218609/1‑149 (MQ=255) cgcgcgAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgcg < 5:230969/149‑1 (MQ=255) gcgAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgcgcgc < 1:323660/149‑1 (MQ=255) cgAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCt < 2:216566/149‑1 (MQ=255) gATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCt < 2:80558/149‑1 (MQ=255) aTGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTg < 6:163832/149‑1 (MQ=255) gCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAg < 3:67066/149‑1 (MQ=255) gACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGa < 5:264736/132‑1 (MQ=255) gACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGa > 6:264736/1‑132 (MQ=255) gggAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTg > 1:64899/1‑124 (MQ=255) gggAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTg < 2:64899/124‑1 (MQ=255) gggAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGc > 5:197604/1‑148 (MQ=255) gggAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTAACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGc > 5:77018/1‑148 (MQ=255) ccgagccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGc > 5:268944/1‑116 (MQ=255) ccgagccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGc < 6:268944/116‑1 (MQ=255) agccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgcgcgc < 5:221107/121‑1 (MQ=255) agccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAgcgcgc > 6:221107/1‑121 (MQ=255) agccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGgcgc > 3:198915/1‑149 (MQ=255) ccgagTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGccc > 5:295446/1‑149 (MQ=255) agTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAg < 8:169067/149‑1 (MQ=255) ccGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTcc > 2:37932/1‑149 (MQ=255) cGAGACCAGGCCTACAAGCTTGCCTTCCGGAACTTCACCGAGCATGGCCGGTGTCTGTTCCTCACTGACCAGTATGGTGTCAGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTcc < 1:261926/149‑1 (MQ=255) cGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCt < 5:104417/149‑1 (MQ=255) cGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCt > 2:98340/1‑149 (MQ=255) gagaCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt > 1:311955/1‑149 (MQ=255) gagaCCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCtt < 2:311955/149‑1 (MQ=255) ccAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGTGCCCCAGGTCCTTGACg > 6:300455/1‑149 (MQ=255) ggCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCg < 6:197604/149‑1 (MQ=255) ccGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGTGCCCCAGGTCCTTGACGTCGGa < 5:300455/149‑1 (MQ=255) ctcccAGCTTTCCTTCCGGCACGTCACCCAGCATGGCCGGTGTCAGTTCCTCACAGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAg < 8:128459/146‑1 (MQ=255) cTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACg > 4:284454/1‑148 (MQ=255) ttCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACg > 8:202385/1‑147 (MQ=255) cGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAgg < 6:295446/148‑1 (MQ=255) cGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAgg < 1:98340/148‑1 (MQ=255) gaactgacACCGGCCATGCTCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAg > 1:143246/8‑146 (MQ=255) gaactgacACCGGCCATGCTCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAg < 2:143246/139‑1 (MQ=255) gCACTTCACCGAGCATGGCCGGTGTCAGTTCATCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAg > 8:201571/1‑149 (MQ=255) aactgacACCGGCCATGCTCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTAGGAGGCACGCTCAAGCAGGTAg > 2:261575/7‑149 (MQ=255) ctgacACCGGCCATGCTCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAgtc > 1:160046/5‑149 (MQ=255) ttCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAgtcgt > 5:130136/1‑149 (MQ=255) cGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTcc < 3:134154/149‑1 (MQ=255) | TCAATACCGTCGACCTTGGAGTATGGCAGGTCGACCAGGCCCATCACCGTGGGGATGCCCATGGCCCGCGCGAGGATGGCGACATGGGAGTTGCCCGAGCCGAGTACCGAGACCAGGCCGACCAGCTTGCCTTCCGGCACTTCACCGAGCATGGCCGGTGTCAGTTCCTCACTGACCAGGATGGTGT‑TGTCGGCATACACCAGCGACTGCGAGCGCGCTTCCTGCAGGTAGGCCAAAAGGCGGCGCCCCAGGTCCTTGACGTCGGAGGCACGCTCACGCAGGTAGTCGTCGTCC > NC_002947/5871481‑5871774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |