| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,887,056 | T→G | 5.8% | intergenic (‑41/‑89) | PP_5161 ← / → PP_5162 | lysophospholipase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,887,056 | 0 | T | G | 5.8% | 276.6 / 5.6 | 86 | intergenic (‑41/‑89) | PP_5161/PP_5162 | lysophospholipase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (45/36); new base G (3/2); total (48/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
GCGGTCGGGGTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCG > NC_002947/5886914‑5887202 | gCGGTCGGGGTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGTAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGAc < 7:240376/149‑1 (MQ=255) gTCGGGGTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGc > 1:40951/1‑148 (MQ=255) ggggTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGAGAGCGGCCTTTCGCGACGCAAgg < 2:107597/149‑1 (MQ=255) gggTGAAAAGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTTATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGc < 6:145724/149‑1 (MQ=255) ggTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAgg < 4:204613/147‑1 (MQ=255) aaaGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTc > 3:211207/1‑149 (MQ=255) aaGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTcc > 7:79714/1‑149 (MQ=255) aGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTcc > 8:179449/1‑148 (MQ=255) gCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCcac < 7:173743/149‑1 (MQ=255) gCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTc < 5:312026/121‑1 (MQ=255) gCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTc > 6:312026/1‑121 (MQ=255) cATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAgg < 6:59487/131‑1 (MQ=255) cATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAgg > 5:59487/1‑131 (MQ=255) aTCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCgg > 8:74826/1‑149 (MQ=255) gTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGgcgc > 3:234890/1‑147 (MQ=255) tCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCttt < 7:74826/149‑1 (MQ=255) ccACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCttt > 7:66313/1‑148 (MQ=255) ccACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCttt > 2:181514/1‑148 (MQ=255) cacaTTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCtttt < 4:234890/148‑1 (MQ=255) tGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGa < 2:40951/149‑1 (MQ=255) tGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGa < 1:47136/149‑1 (MQ=255) cAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCAGCTCGATCAACCCGCATCGAACTAATTGCGGGCGCGGCCTTTCGCGACGCAAGGCCGCTCGCACAGGGATCGGCGCCAGCTTTTAGAAATTGAg > 8:173199/1‑148 (MQ=38) cAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAg > 7:98107/1‑148 (MQ=255) cAAGGATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCCTGGCAAGCTTGCTCACCTCGACCACCCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGCCGCACGGCCGCTCCCCCAGGGATCGGCGCCAGCTGTTAGAAATGGAg > 7:93598/1‑148 (MQ=255) aaGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGc < 7:293152/103‑1 (MQ=255) aaGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGc > 8:293152/1‑103 (MQ=255) aGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCaa < 4:211207/149‑1 (MQ=255) aTCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGtt > 5:328070/1‑149 (MQ=255) tGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTccc < 6:317822/104‑1 (MQ=255) tGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTccc > 5:317822/1‑104 (MQ=255) aaTCTTCAGCGCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGTACTAAGTGCGGGAGCGGCCTGTCGCGACGCAAGGCCGCTCGCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTcc < 8:93598/149‑1 (MQ=37) aTCTTCAGCTCTGGCCGGCGCGATGGGAATCTTGCTCACCTCGAACAACCAGCATCTAACTAATTGCGGTAGCGGCCTTTCGCGACTCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTATAAATTGAGCAAGACAGTTGCTTcc < 8:98107/148‑1 (MQ=37) ttCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCcac > 7:252982/1‑147 (MQ=255) ctctGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGc > 6:93979/1‑148 (MQ=255) tGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAgg > 8:222732/1‑143 (MQ=255) tGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAgg < 7:222732/143‑1 (MQ=255) gCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGc > 6:62085/1‑143 (MQ=255) gCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGc < 5:62085/143‑1 (MQ=255) ggCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGActc > 8:154870/1‑149 (MQ=255) gcgcCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGActct < 7:72001/149‑1 (MQ=255) cATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCTGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCAt < 7:154870/149‑1 (MQ=255) cATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCAt < 6:328070/149‑1 (MQ=255) cATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCAt < 8:66313/149‑1 (MQ=255) cAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATa < 7:179449/149‑1 (MQ=255) gCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAat > 8:63215/1‑149 (MQ=255) cTCACCTCGACCAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatc < 2:319629/149‑1 (MQ=255) cTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatc < 8:252982/149‑1 (MQ=255) tCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAg > 3:100108/1‑105 (MQ=255) tCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAg < 4:100108/105‑1 (MQ=255) tCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatca > 8:62079/1‑149 (MQ=255) aCCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcat > 6:4168/1‑148 (MQ=255) ccTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcatc > 4:66625/1‑148 (MQ=255) tCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGgcgc > 5:195659/1‑74 (MQ=255) tCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGgcgc < 6:195659/74‑1 (MQ=255) gAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCAt < 4:210535/128‑1 (MQ=255) gAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCAt > 3:210535/1‑128 (MQ=255) caacCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCt > 3:180909/1‑149 (MQ=255) aacCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtg > 3:233722/1‑149 (MQ=255) acCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgt < 5:4168/149‑1 (MQ=255) gCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTACATGAATAGCCGAATCATCAAACCGCTGTGCAc > 1:280275/1‑149 (MQ=255) aTCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACgg > 2:70124/1‑149 (MQ=255) aTCGAACTAATTGCGGGAGCGGCATTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTATAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACAGACTCTTCATGAATAGACGAATCATCAAACAGCTGTGCActg > 1:117531/1‑147 (MQ=37) gAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGCATCATCAAACCGCTGTGCACGGTCa > 8:70075/1‑149 (MQ=255) gAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCa < 5:93979/149‑1 (MQ=255) gAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCa > 1:35987/1‑149 (MQ=255) aaCTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCAt > 5:115942/1‑149 (MQ=255) aaTTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGcc > 4:29486/1‑149 (MQ=255) aTTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGcc < 3:29486/148‑1 (MQ=255) tGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCaaa < 4:61973/125‑1 (MQ=255) tGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCaaa > 3:61973/1‑125 (MQ=255) gtgggAGCGGCCTTGCGTCGCGAAAGGCCGCTCCCGCAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACgg < 4:191461/135‑1 (MQ=37) gtgggAGCGGCCTTGCGTCGCGAAAGGCCGCTCCCGCAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACgg > 3:191461/3‑137 (MQ=37) gCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttg < 2:35987/148‑1 (MQ=255) cGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttgtt > 5:4701/1‑149 (MQ=255) gggAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCAc > 8:8019/1‑92 (MQ=255) gggAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCAc < 7:8019/92‑1 (MQ=255) gAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGActc > 5:179909/1‑96 (MQ=255) gAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGActc < 6:179909/96‑1 (MQ=255) gAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGt > 8:205803/1‑149 (MQ=255) gAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAAAAGCTGTATCATCAAACCGCTGTGCACGGTCCTCGCCTTGTTgg > 1:268820/1‑148 (MQ=255) cGGCCTTGCGTCGCGAAAGGCCGCTCCCGCAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACg > 3:176266/1‑129 (MQ=37) cGGCCTTGCGTCGCGAAAGGCCGCTCCCGCAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACg < 4:176266/129‑1 (MQ=37) cGGCCTTGCGTCACGAAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCgg > 7:279666/1‑149 (MQ=255) gCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGgcg > 3:83256/1‑149 (MQ=255) cTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttg < 6:327556/137‑1 (MQ=255) cTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGACACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttg > 5:327556/1‑137 (MQ=255) tttCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCg > 4:231865/1‑149 (MQ=255) | GCGGTCGGGGTGAAAGGCAGGGGGCATCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCG > NC_002947/5886914‑5887202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |