| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,914,124 | C→T | 8.3% | intergenic (+16/+137) | spuI → / ← argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,914,124 | 0 | C | T | 8.3% | 242.7 / 9.2 | 84 | intergenic (+16/+137) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (42/35); new base T (3/4); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.94e-01 | |||||||||||
GATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGC > NC_002947/5913982‑5914270 | gaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAgg > 6:285093/1‑149 (MQ=255) aTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGATTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAggg < 6:28151/149‑1 (MQ=255) tGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggcggc > 3:276519/1‑149 (MQ=255) gAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGgcggcg > 4:61164/1‑149 (MQ=255) aaCAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGgcggcg < 3:156988/148‑1 (MQ=255) aCAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGtt < 6:194155/149‑1 (MQ=255) aaGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGtttt > 8:296930/1‑149 (MQ=255) aGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGttttc < 4:149954/149‑2 (MQ=255) gTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttg > 7:71811/1‑149 (MQ=255) tACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgt < 6:301101/149‑1 (MQ=255) tACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgt > 4:179255/1‑149 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 3:210551/1‑149 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 7:121324/1‑149 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt < 3:179255/149‑1 (MQ=255) aTCGATCCGAAGTACATCGATATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 5:167733/1‑148 (MQ=255) aTCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGtt < 7:275542/141‑1 (MQ=255) aTCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGtt > 8:275542/1‑141 (MQ=255) tCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 5:152476/1‑147 (MQ=255) tCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTga < 5:8683/149‑1 (MQ=255) gATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTgaga < 6:152476/149‑1 (MQ=255) tCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAAAGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGAcc > 7:49562/1‑149 (MQ=255) cGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttttt > 2:224842/1‑137 (MQ=255) cGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttttt < 1:224842/137‑1 (MQ=255) cGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCg < 8:121324/148‑1 (MQ=255) gAAGTACATCGACATCTTCGTCTCGTGCAAGGAAAGCGAGGTGGAAGAGTTCTAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGgt < 7:175239/149‑1 (MQ=255) gAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGgt > 1:66705/1‑149 (MQ=255) gTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTC < 4:210551‑M1/149‑1 (MQ=255) cATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCTTGAGGggc > 1:143598/1‑121 (MQ=255) cATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCTTGAGGggc < 2:143598/121‑1 (MQ=255) gACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT > 1:158910‑M1/1‑149 (MQ=255) ttCGTCGCGTGCAAGGAAAGCGGGCTGGAAGAGTTCGAGCACTAGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCG > 7:203412‑M1/1‑148 (MQ=255) cgtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGG < 7:7261‑M1/147‑1 (MQ=255) gtcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGC < 8:71811‑M1/148‑1 (MQ=255) tcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCAC < 5:285093‑M1/149‑1 (MQ=255) tcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCAC < 4:31693‑M1/149‑1 (MQ=255) tcgCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCAC > 7:223291‑M1/1‑149 (MQ=255) gTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCCCGCCC > 6:99705‑M1/1‑149 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCC > 8:163263‑M1/1‑149 (MQ=255) gAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCg < 3:61164/149‑1 (MQ=255) aGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAg < 2:66705/149‑1 (MQ=255) tGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAAtt > 8:131105/1‑149 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGGAAttt > 7:34963/1‑149 (MQ=255) gagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 2:67690/149‑1 (MQ=255) gTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAgg > 4:231693/1‑149 (MQ=255) ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGc < 6:167733/149‑1 (MQ=255) ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGc > 3:236271/1‑149 (MQ=255) ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGc > 2:80327/1‑149 (MQ=255) cGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggctt > 2:11375‑M1/1‑128 (MQ=255) cGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCt < 7:163263/148‑1 (MQ=255) cGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCt < 3:231693/148‑1 (MQ=255) gAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTg > 3:111852/1‑148 (MQ=255) cACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGaa > 4:113682/1‑147 (MQ=255) cACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGaa < 3:113682/147‑1 (MQ=255) cTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCCCGCCCGCTCCCGCAGGGGTATTTCGAAGGCTGAAGCCt > 3:63078/1‑149 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAg > 7:121108/1‑138 (MQ=255) tCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAg < 8:121108/138‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGc < 2:243823/138‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGc > 1:243823/1‑138 (MQ=255) tcCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTTATTTCGAAGGCTGAAGCCtgggtct > 1:239759/1‑143 (MQ=255) ccGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattac > 1:151744‑M1/1‑114 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTCTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAc < 1:80327/146‑1 (MQ=255) cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgc < 1:11375‑M1/149‑41 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGc < 4:120689/133‑1 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGc > 3:120689/1‑133 (MQ=255) gAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgg > 2:158910‑M2/1‑146 (MQ=255) gTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggag < 2:151744‑M1/149‑46 (MQ=255) gTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggag > 7:163837‑M1/1‑104 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcg < 8:163837‑M1/148‑48 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgg > 7:131105‑M2/1‑141 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcg > 4:276519‑M2/1‑141 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCCCTCCCCCAGGGGAATTTGGAAGGCTGAAGCCTGTGACTTACCTCTgggagcgg < 8:3031‑M2/149‑9 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggc > 4:111852‑M2/1‑139 (MQ=255) cATACCGTGTAAACGAAACCGCCGCCCCTCACGGGCGGCTTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGCCACGCCCGCTCCCCCAGGGTAATTTCGAAGGCGGAAGCGTGTCACTAACCTGGgggagcgggcgtgcccgcgaa > 7:45052‑M2/1‑128 (MQ=255) tACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaaga > 4:236271‑M2/1‑126 (MQ=255) aCCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagag < 6:129930‑M2/149‑25 (MQ=255) ccGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagg < 1:208166‑M2/149‑26 (MQ=255) ccGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagag > 5:129930‑M2/1‑124 (MQ=255) aaCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 1:321043/108‑1 (MQ=255) aCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 5:17598/107‑1 (MQ=255) aCGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa > 6:17598/1‑107 (MQ=255) caaaaaCGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgtg < 3:17106/103‑1 (MQ=38) caaaaaCGCCGCCCTTGAGGGGCGGCGTTTTAGTTTGAGACCCGTGTAGCCCTCT‑TCGCGGGCACGCCCCCTCCCGCACGGTAATTTAGAAGGCTGAAGCCtgtg > 4:17106/3‑105 (MQ=25) aCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc < 2:293916‑M1/120‑51 (MQ=255) aCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc > 1:293916‑M1/1‑70 (MQ=255) cccTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 1:77461/94‑1 (MQ=255) cccTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa > 2:77461/1‑94 (MQ=255) cccGCACGGGCGGCGTTTTTGTTTGAGCCCGGTGGCGCCCGCT‑TCGCGGGCCCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTCAAGCCTGTGACTTACCTGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGc < 7:296930/149‑1 (MQ=255) | GATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCT‑TCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGC > NC_002947/5913982‑5914270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |