| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,980,180 | G→C | 10.3% | Q275H (CAG→CAC) ‡ | PP_5242 → | GAF domain‑containing sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,980,180 | 0 | G | C | 10.3% | 199.9 / 12.8 | 68 | Q275H (CAG→CAC) ‡ | PP_5242 | GAF domain‑containing sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base G (31/30); new base C (3/4); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
GCAGCCGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCG > NC_002947/5980042‑5980319 | gCAGCCGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCCCACTGCCGCTGGCAGTgag < 4:170445/149‑3 (MQ=255) aGCCGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCCCGGCCGCGGGCAGGGGgcc > 1:202783/1‑149 (MQ=255) ccGCGGGCGGCCAGCGCAGCGGACAGCAAGGGGCCGCACTCCCGCAGCCTGGGCCTGGCAACGGCCGTGGCCAACGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCCCACTGCCGCTGGCAGTGAgccaa < 4:189903/149‑3 (MQ=255) ccGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGgccgc < 8:123435/149‑1 (MQ=255) ccGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGgccgc < 8:127741/149‑1 (MQ=255) cgcgGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGgccgcc > 6:9191/1‑149 (MQ=255) gggcggCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCca > 1:116717/1‑148 (MQ=255) ggcggcCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCcac > 2:305928/1‑148 (MQ=255) ggcCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACaaaa > 6:165636/1‑149 (MQ=255) ggcCAGCGAAGCGGACAGCAAGGCGCCGCACTCCCTCAGCCTGGGCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACaaaa < 5:233661/149‑1 (MQ=255) gcCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAAc < 5:9191/149‑1 (MQ=255) ccAGCGGAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAAc > 8:290894/1‑148 (MQ=255) gCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCAcc > 1:216500/1‑149 (MQ=255) aGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCAc < 2:205132/149‑1 (MQ=255) cAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCAccc < 8:3817/149‑1 (MQ=255) ggTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAg < 6:233535/149‑1 (MQ=255) gTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAgg < 2:216500/149‑1 (MQ=255) gCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATg > 3:142786/1‑130 (MQ=255) gCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATg < 4:142786/130‑1 (MQ=255) tCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCCCACTGCCGCTGGCAGTGAgccaa > 3:145138/1‑108 (MQ=255) tCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCCCACTGCCGCTGGCAGTGAgccaa < 4:145138/110‑3 (MQ=255) ccTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGAcc < 2:305305/149‑1 (MQ=255) ccTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGAcc > 6:40832/1‑149 (MQ=255) ccTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGAcc > 5:259351/1‑149 (MQ=255) ccTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGAcc > 4:301197/1‑149 (MQ=255) cTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGAccc < 2:116717/149‑1 (MQ=255) aGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCgg < 5:165636/148‑1 (MQ=255) aGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCgg < 7:290894/148‑1 (MQ=255) gTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATg < 7:40686/111‑1 (MQ=255) gTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATg > 8:40686/1‑111 (MQ=255) ccTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGCGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCCGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCg > 5:261235/1‑149 (MQ=255) cTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCgg > 2:134737/1‑149 (MQ=255) gCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCa > 2:110368/1‑149 (MQ=255) cAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCAc > 6:48825/1‑149 (MQ=255) cAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCAc < 1:134737/149‑1 (MQ=255) aaaGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCAcg > 4:222883/1‑149 (MQ=255) ggCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCAcgcgc < 5:48825/149‑1 (MQ=255) gCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCCCCCCAGGCTGCGCCGCCCCGGTAGCGCCCGGCCACGCGCACCT‑Gtt > 4:82059/1‑149 (MQ=255) ccAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCg < 3:129732/67‑1 (MQ=255) ccAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCg > 4:129732/1‑67 (MQ=255) cAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGTCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTg > 4:224001/1‑149 (MQ=255) cAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTg > 3:306036/1‑149 (MQ=255) cAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTg > 5:96763/1‑149 (MQ=255) aaaGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTgg < 3:222883/149‑1 (MQ=255) ccGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCgcgg < 1:305928/149‑1 (MQ=255) aCGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGcc > 5:152345/1‑149 (MQ=255) ccGCTACCAGA‑‑GCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCa > 1:45370/1‑148 (MQ=255) cGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGc > 1:98326/1‑148 (MQ=255) ccAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCaaaa < 5:290673/147‑1 (MQ=255) gcgcgcCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCAccc > 5:90293/1‑149 (MQ=255) gcCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCctgct > 7:2384/1‑149 (MQ=255) ttGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTgctgct > 5:120812/1‑148 (MQ=255) gCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCctgct < 4:299533/143‑1 (MQ=255) gCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCctgct > 3:299533/1‑143 (MQ=255) cAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAg < 4:306036/149‑1 (MQ=255) aGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAgg > 1:292994/1‑149 (MQ=255) gACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCtt < 6:259351/149‑1 (MQ=255) gACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCt < 8:2384/148‑1 (MQ=255) ggcggCCCACTGCCGCTGGCAGTGAGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTAt < 6:298890/123‑1 (MQ=255) ggcggCCCACTGCCGCTGGCAGTGAGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTAt > 5:298890/4‑126 (MQ=255) ggCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCTCGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAg < 1:71762/140‑1 (MQ=255) ggCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCgcgg < 6:149347/105‑1 (MQ=255) ggCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCgcgg > 5:149347/1‑105 (MQ=255) ggCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAg > 2:71762/1‑139 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCt < 2:273106/142‑1 (MQ=255) aCTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgcg < 3:301197/147‑1 (MQ=255) aCTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgcg < 6:120812/147‑1 (MQ=255) aCTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgcg < 5:40832/147‑1 (MQ=255) | GCAGCCGCGGGCGGCCAGCGAAGCGGACAGCAAGGTGCCGCACTCCCTCAGCCTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGCCCGGCCACGCGCGCCT‑GTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCG > NC_002947/5980042‑5980319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |