| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,087,362 | A→C | 5.7% | Q295P (CAG→CCG) | oruR → | ornithine utilization transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,087,362 | 0 | A | C | 5.7% | 274.7 / 4.6 | 84 | Q295P (CAG→CCG) | oruR | ornithine utilization transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (36/43); new base C (2/3); total (38/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAG > NC_002947/6087220‑6087510 | cTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCa > 5:295291/1‑143 (MQ=255)cTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCa < 6:295291/143‑1 (MQ=255)cTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCt > 4:92757/1‑149 (MQ=255) ttGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 3:155192/1‑148 (MQ=255) ttGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 1:262663/1‑148 (MQ=255) aaTTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGcagcag < 4:266766/148‑1 (MQ=255) aTTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGtt < 2:38938/149‑1 (MQ=255) ttCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGACAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTa > 7:269339/1‑149 (MQ=255) ctggTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa < 3:171357/147‑1 (MQ=255) gCCAGGCATGGCTGGGACGTATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTg < 8:163485/149‑1 (MQ=255) ccAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGt < 3:92757/149‑1 (MQ=255) ggCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTgg < 2:262115/149‑1 (MQ=255) gCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGa < 5:95994/149‑1 (MQ=255) gCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGACAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTgg < 8:269339/148‑1 (MQ=255) cATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGAc < 4:212453/149‑1 (MQ=255) gcggggACGGATGCGCCCGCTGCTGGCGCAGCACCGGGCCGCAGCACCCGGGCGGGCTGGGCTTGCGCGGCCGCTGACCTGCTCTGCGCGCACCCTGCGCCGGCATTTGCCGGCGCTGGGCAGCAGTTAGCACCAGCTGGTGGACGAGc < 6:306634/146‑1 (MQ=255) gCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAg < 1:194468/148‑1 (MQ=255) gCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGc < 5:64676/149‑1 (MQ=255) tGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCt > 4:299216/1‑148 (MQ=255) aCGGATTCGCCAGCTGCTGGCGCAGCTACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGt > 1:172039/1‑149 (MQ=255) aCGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca < 1:287496/119‑1 (MQ=255) aCGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca > 2:287496/1‑119 (MQ=255) ggATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTc < 3:150146/149‑1 (MQ=255) gCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCgg > 1:301285/1‑149 (MQ=255) gCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCgg < 2:262663/149‑1 (MQ=255) tgctgGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAg > 3:42367/1‑149 (MQ=255) ctgGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGc < 3:287861/148‑1 (MQ=255) gcgcAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGt > 7:238417/1‑130 (MQ=255) gcgcAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGt < 8:238417/130‑1 (MQ=255) gcagcaACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGc > 4:32113/1‑149 (MQ=255) gcagcaACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGc > 1:128193/1‑149 (MQ=255) cagcaACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATc < 1:197146/103‑1 (MQ=255) cagcaACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATc > 2:197146/1‑103 (MQ=255) aCTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCg < 6:188344/149‑1 (MQ=255) cTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTAt > 3:34755/1‑96 (MQ=255) cTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTAt < 4:34755/96‑1 (MQ=255) cTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa > 3:111855/1‑99 (MQ=255) cTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa < 4:111855/99‑1 (MQ=255) cTGGACGCAGCACCCGGGCTGGAACGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGa > 7:198345/1‑149 (MQ=255) gACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCTCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATg < 1:158769/148‑1 (MQ=255) agcaCCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGt > 1:323110/1‑98 (MQ=255) agcaCCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGt < 2:323110/98‑1 (MQ=255) cGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGa < 3:32113/149‑1 (MQ=255) ggCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATc < 3:299216/149‑1 (MQ=255) cTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTa > 6:96457/1‑149 (MQ=255) gAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa < 6:315818/78‑1 (MQ=255) gAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa > 5:315818/1‑78 (MQ=255) gAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTAc < 2:301285/147‑1 (MQ=255) gAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCAGCGCCTGCAAATGCCGGCGCAgggt < 8:283270/66‑2 (MQ=18) gAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCAGCGCCTGCAAATGCCGGCGCAgggt > 7:283270/1‑65 (MQ=18) gCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGcc < 6:290190/106‑1 (MQ=255) gCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGcc > 5:290190/1‑106 (MQ=255) gCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑Tg < 4:42367/149‑1 (MQ=255) cTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑Tg > 3:304139/1‑148 (MQ=255) ttGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑Tg > 1:21966/1‑147 (MQ=255) gcgcGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCa < 7:273083/147‑1 (MQ=255) cgcgGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCaga < 4:304139/148‑1 (MQ=255) ggCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACt > 2:74812/1‑149 (MQ=255) aGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTg < 7:167810/149‑1 (MQ=255) gATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATTAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTg < 2:288573/148‑1 (MQ=255) gATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTgg < 4:155192/149‑1 (MQ=255) aTGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTggg > 4:44644/1‑149 (MQ=255) gAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTgggg < 2:281865/148‑1 (MQ=255) gAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTgggg > 1:281865/1‑148 (MQ=255) tGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTg > 5:90030/1‑141 (MQ=255) tGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTg < 6:90030/141‑1 (MQ=255) gCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAgaga < 8:176301/135‑1 (MQ=255) gCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAgaga > 7:176301/1‑135 (MQ=255) ctctTCGCGCACCCTGCGCCGGCATTTGCAGGCGGTGGGCAGCAGTTATCAACAGGTTTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGt < 7:37737/148‑1 (MQ=255) ctctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGt < 1:74812/148‑1 (MQ=255) tctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGt > 5:142121/1‑147 (MQ=255) ctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATg > 2:294865/1‑110 (MQ=255) ctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATg < 1:294865/110‑1 (MQ=255) gcgcACCCTGCGCCGGCATTTCCAGGCGCTGGGCAGCAGTTATCAACTGGTGTTGTACGAGCTGAGGTTTGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCTGTGACTTTGGGGTTCAGTGAGACg < 7:47541/148‑1 (MQ=255) cgcACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGTAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGc > 5:96256/1‑149 (MQ=255) ctgcccAGCGCCTGCAAATGCCGGCGCTGGGCAGCAGTTAACAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTggg > 4:153465/4‑133 (MQ=255) ctgcccAGCGCCTGCAAATGCCGGCGCTGGGCAGCAGTTAACAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTggg < 3:153465/130‑1 (MQ=255) cgcCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGtttt < 3:44644/147‑1 (MQ=255) ccGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCgg > 8:235260/1‑148 (MQ=255) cGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATAAGGAGAGAGTTTGTGGTTAAGTGAGACGGCCAGTTTTAgg > 1:108108/1‑148 (MQ=255) tGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTc > 5:283938/1‑149 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGATCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTc > 5:245567/1‑148 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGc > 5:264944/1‑72 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGc < 6:264944/72‑1 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTc > 5:190733/1‑148 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTc < 6:142121/148‑1 (MQ=255) aGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAg > 2:280407/1‑149 (MQ=255) | CTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAGCACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAT‑TGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAG > NC_002947/6087220‑6087510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |