Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 6,127,162 | C→G | 8.9% | V241V (GTG→GTC) ‡ | PP_5375 ← | LysR family transcriptional regulator |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 6,127,162 | 0 | C | G | 8.9% | 195.3 / 7.3 | 66 | V241V (GTG→GTC) ‡ | PP_5375 | LysR family transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base C (28/32); new base G (3/3); total (31/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.52e-01 |
CGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAAGCCAGAGCC > NC_002947/6127022‑6127310 | cGCACTCTGTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCTGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTg < 7:206067/149‑1 (MQ=255) cACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGT‑GGCCCTGGc < 2:263204/149‑1 (MQ=255) cACGCTTTCACGAGGACCACGCTCCGTGGACGACTCCAGCAGGCAGAACTTGGAGTCGCTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAAAGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGc > 2:105005/1‑149 (MQ=255) aCGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGT‑GGCCCTGGcc < 3:73700/149‑1 (MQ=255) gCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCAc < 6:172251/149‑1 (MQ=255) ttCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTg > 2:154923/1‑148 (MQ=255) cACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGAt < 4:280451/148‑1 (MQ=255) gAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGcc < 7:73493/149‑1 (MQ=255) aGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGcc > 3:161465/1‑148 (MQ=255) ggACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGGTGCCCCAGGCCAGGGCCC‑CGCCCTGGCCACTGAGCGCCGa > 8:103342/1‑149 (MQ=255) cACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTg > 2:313611/1‑148 (MQ=255) gCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGACCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGAt > 5:148451/1‑148 (MQ=255) gtCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGTGCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCa < 4:161465/148‑1 (MQ=255) ggTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGc < 7:103342/148‑1 (MQ=255) gTGGACGACTCCAGCAGGCAGAAGTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGATCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCAt > 7:201667/1‑149 (MQ=255) tGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGT‑GGCCCTGGcctg > 1:7124/1‑124 (MQ=255) tGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGT‑GGCCCTGGcctg < 2:7124/126‑3 (MQ=255) gacgacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGCCTGGATCAGCATAcc > 5:317177/1‑149 (MQ=255) acTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAg < 7:208115/149‑1 (MQ=255) acTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAg < 6:247857/149‑1 (MQ=255) cTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGc < 5:122826/149‑1 (MQ=255) cagcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCt < 4:176805/110‑1 (MQ=255) cagcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCt > 3:176805/1‑110 (MQ=255) cagcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGt < 2:260211/149‑1 (MQ=255) cagcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGt > 7:176708/1‑149 (MQ=255) gcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGatat > 8:207841/1‑149 (MQ=255) gcagAACTTGGCGTCGGTCAGGACTACAACAACGTTGGGCATGAACAGCGCACAGGTGATAAACGAATCGACCACCAGGTTCCGCCAGGACAGCGCGA‑CGCCCATGCCACGGATCCCCGACTGTATCAGCATACAGTAGCTGTTGatat > 4:217971/1‑149 (MQ=255) aCTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCAAGGCCAGGGCCATCGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGAc < 1:88982/149‑1 (MQ=255) ggTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTgg < 1:154923/149‑1 (MQ=255) ggAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACACGATGCTTGGGGGt > 5:70899/1‑148 (MQ=255) gAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCCGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCa > 5:204696/1‑149 (MQ=255) gTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGTGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATg < 7:207841/149‑1 (MQ=255) acaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTc > 2:247223/1‑149 (MQ=255) acaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACACGATGCTTGGGGGTCATGGGCTc < 6:70899/149‑1 (MQ=255) ggCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAg < 1:313611/149‑1 (MQ=255) ttGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGgcg > 2:79072/1‑149 (MQ=255) cAGCGCACCGGTGCTCAAGGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATTGGCTCGTATCCCAGGCGCTTGa < 1:105005/149‑1 (MQ=255) cAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCt < 8:28983/131‑1 (MQ=255) cAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCt > 7:28983/1‑131 (MQ=255) aGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGaa < 6:204696/149‑1 (MQ=255) gcgcACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAAc < 8:176708/149‑1 (MQ=255) cACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCAt < 1:294180/149‑1 (MQ=255) cGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCg > 3:305836/1‑149 (MQ=255) ggTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCgg < 8:201667/149‑1 (MQ=255) gTGCTCAACGCATCGTCCACCAGGTTGCCCGAGGCCAGGGCCA‑CGCCCTGGGCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCGTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCggg < 7:6258/149‑1 (MQ=255) gTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCggg > 1:213882/1‑149 (MQ=255) tCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCg < 4:32686/143‑1 (MQ=255) tCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCg > 3:32686/1‑143 (MQ=255) aaCGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAAc < 6:317177/148‑1 (MQ=255) tCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCa > 2:34852/1‑149 (MQ=255) gTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGt < 1:247223/149‑1 (MQ=255) caccaGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTcgc > 5:282103/1‑149 (MQ=255) accaGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTcgcg > 4:285645/1‑149 (MQ=255) caGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCAACTGATCGCCGACTGGATCAGCATACCGTAGATGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTGGGGCCAACCTACCCAGTcgcggt > 7:202450/1‑147 (MQ=255) ttGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGa < 3:285645/149‑1 (MQ=255) tGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAg > 6:311374/1‑149 (MQ=255) gCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTa > 7:16008/1‑131 (MQ=255) gCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTa < 8:16008/131‑1 (MQ=255) cccAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCt > 5:155348/1‑149 (MQ=255) cccAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCt > 4:78920/1‑149 (MQ=255) cagtggccaggGCGT‑GGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCt > 5:280282/5‑149 (MQ=255) caggccaggGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCtt > 6:266951/1‑148 (MQ=255) aggccaggGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACTCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACGATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCa < 6:148451/149‑1 (MQ=255) ggccaggGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCaa < 6:282103/149‑1 (MQ=255) atttgCCA‑CGCCCTTGCCACTGATCGCAGACTGGATCATGATTCCGTAGCTGTTGATATTTACTCGATTCTTGGGGGTCATGGGCTCGTATCCCAGGCTCTTGAACTATTGGGGGCAACCTACCCATTCGCGCTGGGAGTCTTCaa < 2:300099/142‑1 (MQ=255) ggCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAagccaga < 1:79072/149‑1 (MQ=255) ccA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCAAGTCGCGCTGGGAGTCTTCaa > 1:300099/1‑141 (MQ=255) cA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCggg < 8:78129/108‑1 (MQ=255) cA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAagccagagcc < 4:305836/149‑1 (MQ=255) | CGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCA‑CGCCCTGGCCACTGATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAAGCCAGAGCC > NC_002947/6127022‑6127310 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |