Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 560,281 T→A 8.2% I132N (ATT→AAT)  secY → protein translocase subunit SecY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947560,2810TA 8.2% 164.9 / 2.7 58I132N (ATT→AAT) secYprotein translocase subunit SecY
Reads supporting (aligned to +/- strand):  ref base T (26/27);  new base A (2/3);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCGTACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGAGCGCGGTGTGGGCAACGGT  >  NC_002947/560133‑560429
                                                                                                                                                    |                                                                                                                                                        
ccGTACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCAt                                                                                                                                                          >  7:51785/1‑149 (MQ=255)
  gTACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTg                                                                                                                                                        <  5:259188/149‑1 (MQ=255)
   tACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTgg                                                                                                                                                       <  1:122584/149‑1 (MQ=255)
   tACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTgg                                                                                                                                                       <  2:215866/149‑1 (MQ=255)
     cATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGc                                                                                                                                                     <  8:51785/148‑1 (MQ=255)
     cATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGc                                                                                                                                                     <  2:200344/148‑1 (MQ=255)
      aTTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCAt                                                                                                                                                   >  8:9274/1‑149 (MQ=255)
      aTTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCAt                                                                                                                                                   >  1:118830/1‑149 (MQ=255)
                    catcatGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCAATggacat                                                                                                                                                   >  2:174459/1‑132 (MQ=255)
                    catcatGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCAATggacat                                                                                                                                                   <  1:174459/136‑5 (MQ=255)
                        atGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAGGCCAATGGACATGCCAAtggcttggacc                                                                                                                                  <  1:208314/148‑4 (MQ=255)
                        atGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAGGCCAATGGACATGCCAAtggcttggac                                                                                                                                   >  7:140850/1‑145 (MQ=255)
                           cAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAGGCCAATGGACATGCCAAtggcttggaccagt                                                                                                                               <  8:140850/148‑7 (MQ=38)
                             gTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAgg                                                                                                                            <  7:9274/149‑1 (MQ=255)
                                gatgaCGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCTCTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGggc                                                                                                                          <  5:14856/148‑1 (MQ=255)
                                    aCGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGggc                                                                                                                          >  1:303171/1‑144 (MQ=255)
                                    aCGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGggc                                                                                                                          <  2:303171/144‑1 (MQ=255)
                                        cggTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGttt                                                                                                                 >  2:59388/1‑149 (MQ=255)
                                         ggTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGtttt                                                                                                                <  2:107450/149‑1 (MQ=255)
                                                 cGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGc                                                                                                        <  7:57669/149‑1 (MQ=255)
                                                    aaCTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGc                                                                                                                                                     >  4:193438/1‑101 (MQ=255)
                                                    aaCTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGc                                                                                                                                                     <  3:193438/101‑1 (MQ=255)
                                                     aCTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTg‑‑‑g                                                                                                 <  8:130742/149‑1 (MQ=255)
                                                      cTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTg                                                                                                             >  6:210006/1‑139 (MQ=255)
                                                      cTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTg                                                                                                             <  5:210006/139‑1 (MQ=255)
                                                       tGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGc                                                                                               >  2:304066/1‑149 (MQ=255)
                                                           gCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTcc                                                                                           <  4:270859/149‑1 (MQ=255)
                                                             aGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTcc                                                                                           <  5:185318/147‑1 (MQ=255)
                                                               ttGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGt                                                                                                            <  8:89147/131‑1 (MQ=255)
                                                               ttGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGt                                                                                                            >  7:89147/1‑131 (MQ=255)
                                                                  aagaagGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATAtcgt                                                                                    >  2:138934/1‑149 (MQ=255)
                                                                       ggaaggTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTGAGTGCCTTCCATAtcgtc                                                                                   >  1:111181/1‑148 (MQ=255)
                                                                       ggaaggTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTg                                                                               >  1:237771/1‑149 (MQ=255)
                                                                        gaaggTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTc                                                                                            >  1:277723/1‑135 (MQ=255)
                                                                        gaaggTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTc                                                                                            <  2:277723/135‑1 (MQ=255)
                                                                               aaGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACt                                                                       >  6:187641/1‑149 (MQ=255)
                                                                                  cTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTc                                                                    >  6:80987/1‑149 (MQ=255)
                                                                                     gCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTg                                                                 >  1:136058/1‑149 (MQ=255)
                                                                                     gCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTg                                                                 >  6:325689/1‑149 (MQ=255)
                                                                                                     ccAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACttt                                                                     >  5:28727/1‑129 (MQ=255)
                                                                                                     ccAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACttt                                                                     <  6:28727/129‑1 (MQ=255)
                                                                                                       aGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGTGCGATGTTCatg                                               <  2:237771/149‑1 (MQ=255)
                                                                                                       aGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCat                                                >  4:143517/1‑148 (MQ=255)
                                                                                                             cccGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTgg                                         <  5:80987/149‑1 (MQ=255)
                                                                                                              ccGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATAtc                                                                                      <  8:208769/103‑1 (MQ=255)
                                                                                                              ccGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATAtc                                                                                      >  7:208769/1‑103 (MQ=255)
                                                                                                              ccGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCa                                                                         <  6:54499/116‑1 (MQ=255)
                                                                                                              ccGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCa                                                                         >  5:54499/1‑116 (MQ=255)
                                                                                                                    cGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTggg                                    <  2:118830/147‑1 (MQ=255)
                                                                                                                     ggCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGc                                   >  4:135181/1‑147 (MQ=255)
                                                                                                                     ggCACCGATATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTCGCCTGGCCAACCACGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGAGGTTCATGCTGTGGCTGGGc                                   >  6:23300/1‑147 (MQ=255)
                                                                                                                       cACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGc                               <  3:135181/149‑1 (MQ=255)
                                                                                                                       cACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGc                               <  1:138934/149‑1 (MQ=255)
                                                                                                                                ccTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCAct                       >  1:114203/1‑147 (MQ=255)
                                                                                                                                ccTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCAcc                       >  6:306007/1‑148 (MQ=255)
                                                                                                                                 cTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACATTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGa                     >  6:104431/1‑149 (MQ=255)
                                                                                                                                          gTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGAGCGCGgtgt            <  5:325689/149‑1 (MQ=255)
                                                                                                                                          gTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGAGCGCGgtgt            <  5:187641/149‑1 (MQ=255)
                                                                                                                                             cAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTACTGTAGGCCTG‑‑‑CGCTTCCATATCGTCGCTGTTTCCACTATCGTGGCAGGCGCGATCATCATGATGTGGCTTGGCGAGCAGATCACCGACCCCGGTGTgg          >  7:251913/1‑148 (MQ=255)
                                                                                                                                                    ttGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACATTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGAGCGCGGTGTGGGCAACGGt  <  5:104431/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                        
CCGTACATTTCGGCATCGATCATCATGCAGTTGATGACGGCGGTCAGCCCGCAACTGGAGCAGTTGAAGAAGGAAGGTGAAGCTGGCCGTCGCAAGATCAGCCAGTACACCCGCTACGGCACCGTTATCCTGGCACTGGTCCAAGCCATTGGCATGTCCATTGGCCTGGCCAACCAGGGCGTGGCGTTTTCTGTAGGCCTG‑‑‑GGCTTCCATATCGTCGCTGTTTCCACTTTCGTGGCAGGCGCGATGTTCATGATGTGGCTGGGCGAGCAGATCACCGAGCGCGGTGTGGGCAACGGT  >  NC_002947/560133‑560429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: